Searching for up to 100 curated homologs for HSERO_RS02190 FitnessBrowser__HerbieS:HSERO_RS02190 (451 a.a.)
Found high-coverage hits (≥70%) to 34 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
BPHYT_RS16115 ABC transporter for D-Sorbitol, periplasmic substrate-binding component from Burkholderia phytofirmans PsJN
66% identity, 97% coverage of query (610 bits)
4ryaA / B9JRF8 Crystal structure of abc transporter solute binding protein avi_3567 from agrobacterium vitis s4, target efi-510645, with bound d-mannitol
61% identity, 92% coverage of query (538 bits)
mtlE / Q4KC57 polyol ABC-type transporter periplasmic substrate-binding protein from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
61% identity, 92% coverage of query (538 bits)
MANBP_PSEAE / Q9I1E0 Mannitol-binding protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
60% identity, 92% coverage of query (529 bits)
AO356_00025 ABC transporter for D-Sorbitol, periplasmic substrate-binding component from Pseudomonas fluorescens FW300-N2C3
56% identity, 96% coverage of query (524 bits)
Pf6N2E2_1963 ABC transporter for D-sorbitol, periplasmic substrate-binding component from Pseudomonas fluorescens FW300-N2E2
56% identity, 96% coverage of query (523 bits)
TC 3.A.1.1.49 / O30491 MtlE, component of The polyol (mannitol, glucitol (sorbitol), arabitol (arabinitol; lyxitol)) uptake porter, MtlEFGK from Pseudomonas fluorescens
58% identity, 97% coverage of query (521 bits)
PS417_12715 ABC transporter for D-Mannitol and D-Sorbitol, periplasmic substrate-binding protein from Pseudomonas simiae WCS417
58% identity, 96% coverage of query (519 bits)
Ac3H11_2944 ABC transporter for D-Sorbitol, periplasmic substrate-binding component from Acidovorax sp. GW101-3H11
59% identity, 91% coverage of query (508 bits)
TC 3.A.1.1.5 / O30831 SmoE, component of Hexitol (glucitol; mannitol) porter from Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
54% identity, 97% coverage of query (486 bits)
PGA1_c13210 ABC transporter for D-Sorbitol, periplasmic substrate-binding component from Phaeobacter inhibens BS107
53% identity, 96% coverage of query (472 bits)
Build an alignment for HSERO_RS02190 and 11 homologs with ≥ 30% identity
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5iaiA / B9JM84 Crystal structure of abc transporter solute binding protein arad_9887 from agrobacterium radiobacter k84, target efi-510945 in complex with ribitol
26% identity, 90% coverage of query (103 bits)
1eu8A / Q7LYW7 Structure of trehalose maltose binding protein from thermococcus litoralis (see paper)
25% identity, 88% coverage of query (98.2 bits)
TC 3.A.1.1.7 / O51923 MalE aka PF1739, component of Maltose/trehalose porter (see paper)
25% identity, 88% coverage of query (98.2 bits)
MALE_THELN / Q7LYW7 Trehalose/maltose-binding protein MalE; TMBP from Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) (see 4 papers)
25% identity, 88% coverage of query (95.9 bits)
smoF / A9CEY9 3-(6-sulfo-α-D-quinovosyl)-sn-glycerol binding protein from Agrobacterium fabrum (strain C58 / ATCC 33970) (see paper)
SMOF_AGRFC / A9CEY9 Sulfoquinovosyl glycerol-binding protein SmoF; SQGro-binding protein SmoF; SQ monooxygenase cluster protein F from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 2 papers)
24% identity, 94% coverage of query (85.9 bits)
6dtqA / G4XU73 Maltose bound t. Maritima male3 (see paper)
25% identity, 84% coverage of query (84.0 bits)
7ofyA Crystal structure of sq binding protein from agrobacterium tumefaciens in complex with sulfoquinovosyl glycerol (sqgro)
24% identity, 90% coverage of query (84.0 bits)
TC 3.A.1.1.41 / G4FGN8 Extracellular solute-binding protein family 1, component of Trehalose porter. Also binds sucrose (Boucher and Noll, 2011). Induced by glucose and trehalose. Directly regulated by trehalose-responsive regulator TreR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
25% identity, 84% coverage of query (83.6 bits)
7yzsAAA Sulfoquinovosyl binding protein
24% identity, 90% coverage of query (83.2 bits)
7qhvAAA / A9CEY9 7qhvAAA (see paper)
24% identity, 90% coverage of query (81.6 bits)
7yzuA Crystal structure of the sulfoquinovosyl binding protein smof complexed with sqme
25% identity, 90% coverage of query (81.3 bits)
3jzjA / B0B0V1 Crystal structures of the gach receptor of streptomyces glaucescens gla.O in the unliganded form and in complex with acarbose and an acarbose homolog. Comparison with acarbose-loaded maltose binding protein of salmonella typhimurium. (see paper)
25% identity, 71% coverage of query (71.6 bits)
3k02A Crystal structures of the gach receptor of streptomyces glaucescens gla.O in the unliganded form and in complex with acarbose and an acarbose homolog. Comparison with acarbose-loaded maltose binding protein of salmonella typhimurium.
25% identity, 71% coverage of query (71.6 bits)
SM_b21221 ABC transporter for D-Glucosamine, periplasmic substrate-binding protein from Sinorhizobium meliloti 1021
25% identity, 97% coverage of query (68.2 bits)
5f7vA / Q8YAE9 Abc substrate-binding protein lmo0181 from listeria monocytogenes in complex with cycloalternan (see paper)
24% identity, 87% coverage of query (66.6 bits)
Dshi_0547 ABC transporter for Xylitol, periplasmic substrate-binding component from Dinoroseobacter shibae DFL-12
23% identity, 95% coverage of query (62.8 bits)
SMc02873 N-Acetyl-D-glucosamine ABC transport system, periplasmic substrate-binding component from Sinorhizobium meliloti 1021
27% identity, 74% coverage of query (57.4 bits)
TC 3.A.1.1.19 / Q8L126 PalE, component of Platinose (isomaltulose) (6-O-α-D-glucopyranosyl-D-fructofuranose) porter from Agrobacterium tumefaciens (see 3 papers)
palE / BAB96538.1 PalE from Agrobacterium tumefaciens (see 3 papers)
24% identity, 70% coverage of query (55.8 bits)
YcjN / b1310 putative ABC transporter periplasmic binding protein YcjN from Escherichia coli K-12 substr. MG1655 (see 4 papers)
TC 3.A.1.1.46 / P76042 Putative ABC transporter periplasmic-binding protein YcjN, component of Probable glucoside uptake porter, YcjNOPV from Escherichia coli (strain K12)
22% identity, 76% coverage of query (55.5 bits)
SM_b21103 ABC transporter for L-Fucose, periplasmic substrate-binding protein from Sinorhizobium meliloti 1021
24% identity, 81% coverage of query (53.1 bits)
4aq4A / P0AG80 Substrate bound sn-glycerol-3-phosphate binding periplasmic protein ugpb from escherichia coli (see paper)
23% identity, 88% coverage of query (52.4 bits)
UgpB / b3453 sn-glycerol 3-phosphate ABC transporter periplasmic binding protein (EC 7.6.2.10) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
UgpB / P0AG80 sn-glycerol 3-phosphate ABC transporter periplasmic binding protein (EC 7.6.2.10) from Escherichia coli (strain K12) (see 5 papers)
UGPB_ECOLI / P0AG80 sn-glycerol-3-phosphate-binding periplasmic protein UgpB; Bile-responsive chaperone from Escherichia coli (strain K12) (see 5 papers)
P0AG80 ABC-type glycerol 3-phosphate transporter (EC 7.6.2.10) from Escherichia coli (see paper)
TC 3.A.1.1.3 / P0AG80 sn-glycerol-3-phosphate-binding periplasmic protein UgpB aka B3453, component of Glycerol-phosphate porter. Transports both glycerol-3-P and glycerol-3-P diesters including glycerophosphocholine but not glycerol-2-P from Escherichia coli (see 4 papers)
ugpB / GB|AAC76478.1 sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Escherichia coli (see 4 papers)
23% identity, 88% coverage of query (52.4 bits)
7bvtA / D2YYD8 Crystal structure of cyclic alpha-maltosyl-1,6-maltose binding protein from arthrobacter globiformis (see paper)
25% identity, 82% coverage of query (43.9 bits)
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Lawrence Berkeley National Laboratory