Searching for up to 100 curated homologs for HSERO_RS03650 FitnessBrowser__HerbieS:HSERO_RS03650 (396 a.a.)
Found high-coverage hits (≥70%) to 31 curated proteins.
Removed hits that are identical to the query, leaving 30
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
BPHYT_RS02050 D-mannose isomerase (EC 5.3.1.7) from Burkholderia phytofirmans PsJN
51% identity, 97% coverage of query (351 bits)
MANI_MARM1 / F2JVT6 D-mannose isomerase; MI; EC 5.3.1.7 from Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) (see paper)
46% identity, 99% coverage of query (343 bits)
Ac3H11_2078 D-mannose isomerase (EC 5.3.1.7) from Acidovorax sp. GW101-3H11
49% identity, 98% coverage of query (325 bits)
Sama_0560 D-mannose isomerase (EC 5.3.1.7) from Shewanella amazonensis SB2B
43% identity, 97% coverage of query (299 bits)
AO353_03400 D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens FW300-N2E3
30% identity, 87% coverage of query (126 bits)
Build an alignment for HSERO_RS03650 and 5 homologs with ≥ 30% identity
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SquS / b3880 sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli K-12 substr. MG1655 (see 8 papers)
yihS / P32140 sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli (strain K12) (see 6 papers)
SQUS_ECOLI / P32140 Sulfoquinovose isomerase; SQ isomerase; Sulfoquinovose-sulfofructose isomerase; SQ-SF isomerase; EC 5.3.1.31 from Escherichia coli (strain K12) (see 3 papers)
yihS / RF|NP_418316 uncharacterized sugar isomerase yihS from Escherichia coli K12 (see paper)
27% identity, 93% coverage of query (124 bits)
SQUS_SALTY / Q8ZKT7 Sulfoquinovose isomerase; SQ isomerase; Sulfoquinovose-sulfofructose isomerase; SQ-SF isomerase; EC 5.3.1.31 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
27% identity, 93% coverage of query (121 bits)
PGA1_c16670 D-mannose isomerase (EC 5.3.1.7) from Phaeobacter inhibens BS107
30% identity, 89% coverage of query (120 bits)
7ag4D / Q8ZKT7 Crystal structure of active site mutant of sq isomerase (yihs-h248a) from salmonella enterica in complex with sulfofructose (sf) (see paper)
27% identity, 93% coverage of query (118 bits)
2zblA Functional annotation of salmonella enterica yihs-encoded protein
27% identity, 93% coverage of query (118 bits)
3wkiA Crystal structure of cellobiose 2-epimerase in complex with cellobiitol
25% identity, 97% coverage of query (86.7 bits)
3wkgA / F8WRK9 Crystal structure of cellobiose 2-epimerase in complex with glucosylmannose (see paper)
25% identity, 97% coverage of query (86.3 bits)
CEEP_RHOMR / F8WRK9 Cellobiose 2-epimerase; CE; EC 5.1.3.11 from Rhodothermus marinus (Rhodothermus obamensis) (see paper)
F8WRK9 cellobiose epimerase (EC 5.1.3.11) from Rhodothermus marinus (see 5 papers)
25% identity, 97% coverage of query (86.3 bits)
3wkhA Crystal structure of cellobiose 2-epimerase in complex with epilactose
25% identity, 97% coverage of query (86.3 bits)
A5FA14 cellobiose epimerase (EC 5.1.3.11) from Flavobacterium johnsoniae (see 2 papers)
20% identity, 98% coverage of query (79.7 bits)
C6VW66 cellobiose epimerase (EC 5.1.3.11) from Dyadobacter fermentans (see 2 papers)
22% identity, 92% coverage of query (79.3 bits)
D0MF61 cellobiose epimerase (EC 5.1.3.11) from Rhodothermus marinus (see paper)
24% identity, 97% coverage of query (79.0 bits)
D2QDA5 cellobiose epimerase (EC 5.1.3.11) from Spirosoma linguale (see paper)
24% identity, 94% coverage of query (75.9 bits)
Dfer_5652 / C6VWU2 mannose 2-epimerase monomer (EC 5.1.3.44) from Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / CIP 107007 / KCTC 52180 / NS114) (see paper)
C6VWU2 mannose 2-epimerase (EC 5.1.3.44) from Runella slithyformis (see paper)
25% identity, 93% coverage of query (75.5 bits)
C6XVU9 cellobiose epimerase (EC 5.1.3.11) from Pedobacter heparinus (see 2 papers)
23% identity, 97% coverage of query (65.5 bits)
Q3M763 N-acylglucosamine 2-epimerase (EC 5.1.3.8) from Trichormus variabilis (see 2 papers)
23% identity, 96% coverage of query (63.9 bits)
8h1lB / A0A7U4E834 Crystal structure of glucose-2-epimerase in complex with d-glucitol from runella slithyformis runsl_4512 (see paper)
21% identity, 92% coverage of query (63.5 bits)
bfce / Q5LH66 cellobiose 2-epimerase (EC 5.1.3.11) from Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) (see 3 papers)
CEEP_BACFN / Q5LH66 Cellobiose 2-epimerase; CE; Mannobiose 2-epimerase; MBE; EC 5.1.3.11 from Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) (see 2 papers)
Q5LH66 cellobiose epimerase (EC 5.1.3.11) from Bacteroides fragilis (see 3 papers)
25% identity, 91% coverage of query (60.8 bits)
E0RU15 cellobiose epimerase (EC 5.1.3.11) from Spirochaeta thermophila (see 2 papers)
25% identity, 90% coverage of query (57.8 bits)
A9AYF3 cellobiose epimerase (EC 5.1.3.11) from Herpetosiphon aurantiacus (see paper)
23% identity, 94% coverage of query (57.0 bits)
G0GBL0 cellobiose epimerase (EC 5.1.3.11) from Spirochaeta thermophila (see paper)
24% identity, 85% coverage of query (55.5 bits)
SMc03111 mannose 6-phosphate isomerase (EC 5.3.1.8) from Sinorhizobium meliloti 1021
PMI / AAA26356.1 phosphomannose isomerase from Sinorhizobium meliloti (see paper)
26% identity, 90% coverage of query (55.1 bits)
F5ITJ6 cellobiose epimerase (EC 5.1.3.11) from Dysgonomonas gadei (see paper)
20% identity, 92% coverage of query (54.7 bits)
A0A0A1HAT7 cellobiose epimerase (EC 5.1.3.11) from uncultured bacterium (see paper)
20% identity, 94% coverage of query (53.9 bits)
A7LVG6 N-acylglucosamine 2-epimerase (EC 5.1.3.8) from Bacteroides ovatus (see paper)
20% identity, 94% coverage of query (47.4 bits)
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Lawrence Berkeley National Laboratory