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Searching for up to 100 curated homologs for HSERO_RS06380 FitnessBrowser__HerbieS:HSERO_RS06380 (431 a.a.)

Found high-coverage hits (≥70%) to 27 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

P39120 Citrate synthase 2; Citrate synthase II; EC 2.3.3.16 from Bacillus subtilis (strain 168)
    30% identity, 73% coverage of query (127 bits)

CISY_HALVD / D4GS06 Citrate synthase; EC 2.3.3.16 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
D4GS06 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Haloferax volcanii (see paper)
    31% identity, 75% coverage of query (120 bits)

Build an alignment

Build an alignment for HSERO_RS06380 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

A4YGX6 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Metallosphaera sedula (see 2 papers)
    28% identity, 73% coverage of query (112 bits)

6abyA / A4YGX6 Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with oxaloacetate (see paper)
    28% identity, 73% coverage of query (112 bits)

6abxA Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with citrate
    28% identity, 73% coverage of query (112 bits)

Q974S5 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Sulfurisphaera tokodaii (see paper)
    28% identity, 73% coverage of query (107 bits)

6abwA / A4YDF6 Crystal structure of citrate synthase (msed_0281) from metallosphaera sedula in complex with acetyl-coa (see paper)
    29% identity, 74% coverage of query (105 bits)

8glbD / P9WPD3 Selenomethionine derivatized citrate synthase (cita) in mycobacterium tuberculosis with pyruvate (see paper)
    29% identity, 74% coverage of query (105 bits)

8gmiA Citrate synthase (cita) in mycobacterium tuberculosis modified by ebselen at c143 residue
    29% identity, 74% coverage of query (105 bits)

8gi7A C143a variant of citrate synthase (cita) in mycobacterium tuberculosis
    28% identity, 74% coverage of query (104 bits)

citZ / Q5UZI9 citrate synthase (EC 2.3.3.3) from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (see paper)
    28% identity, 76% coverage of query (102 bits)

CISY_BACSU / P39119 Citrate synthase 1; Citrate synthase I; EC 2.3.3.16 from Bacillus subtilis (strain 168) (see paper)
    28% identity, 75% coverage of query (102 bits)

2c6xA / P39119 Structure of bacillus subtilis citrate synthase
    28% identity, 75% coverage of query (102 bits)

1ixeA Crystal structure of citrate synthase from thermus thermophilus hb8
    28% identity, 74% coverage of query (102 bits)

citA / CAA74489.1 Citrate synthase I from Bacillus subtilis (see 3 papers)
    27% identity, 75% coverage of query (101 bits)

Q96ZM7 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Sulfurisphaera tokodaii (see paper)
    27% identity, 73% coverage of query (100 bits)

Q5SIM6 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Thermus thermophilus (see paper)
    28% identity, 74% coverage of query (97.1 bits)

1iomA / Q5SIM6 Crystal structure of citrate synthase from thermus thermophilus hb8 (see paper)
    28% identity, 74% coverage of query (97.1 bits)

Q8ZWP2 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Pyrobaculum aerophilum (see paper)
    27% identity, 73% coverage of query (91.3 bits)

1aj8A / Q53554 Citrate synthase from pyrococcus furiosus (see paper)
    23% identity, 73% coverage of query (85.1 bits)

Q53554 citrate (Si)-synthase (EC 2.3.3.1) from Pyrococcus furiosus (see paper)
    23% identity, 73% coverage of query (85.1 bits)

P9WPD5 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Mycobacterium tuberculosis (see paper)
    29% identity, 74% coverage of query (85.1 bits)

P9WPD5 Citrate synthase 1; EC 2.3.3.16 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
    29% identity, 74% coverage of query (85.1 bits)

A8YCJ7 citrate synthase (unknown stereospecificity) (EC 2.3.3.16) from Microcystis aeruginosa (see paper)
    25% identity, 74% coverage of query (82.8 bits)

PRPC_MYCTE / H8F0D7 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; CS; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman) (see paper)
PRPC_MYCTU / I6Y9Q3 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
    26% identity, 70% coverage of query (77.4 bits)

CISYC_DICDI / Q86AV6 Citrate synthase; EC 2.3.3.16 from Dictyostelium discoideum (Social amoeba) (see paper)
    26% identity, 74% coverage of query (72.8 bits)

4tvmA / P9WPD5 Structure of citrate synthase from mycobacterium tuberculosis (see paper)
    29% identity, 74% coverage of query (65.9 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory