Searching for up to 100 curated homologs for HSERO_RS12110 FitnessBrowser__HerbieS:HSERO_RS12110 (331 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PGA1_c07300 Inositol transport system sugar-binding protein from Phaeobacter inhibens BS107
    48% identity, 100% coverage of query (334 bits)

4ru1A / A0LVW8 Crystal structure of carbohydrate transporter acei_1806 from acidothermus cellulolyticus 11b, target efi-510965, in complex with myo-inositol
    30% identity, 93% coverage of query (129 bits)

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Build an alignment for HSERO_RS12110 and 2 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

3c6qC Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
    24% identity, 89% coverage of query (87.4 bits)

2h3hA / Q9WXW9 Crystal structure of the liganded form of thermotoga maritima glucose binding protein (see paper)
    24% identity, 89% coverage of query (87.0 bits)

6gt9A / W8QN64 Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with galactose
    24% identity, 75% coverage of query (74.3 bits)

6guqA Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with glucose
    24% identity, 76% coverage of query (74.3 bits)

XYLF_SULAC / Q4J710 Xylose/arabinose-binding protein XylF; D-xylose/L-arabinose substrate binding protein; SBP from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
Q4J710 ABC-type D-xylose/L-arabinose transporter (subunit 1/2) (EC 7.5.2.13) from Sulfolobus acidocaldarius (see paper)
    24% identity, 76% coverage of query (69.7 bits)

5xssA / A6LW07 Xylfii molecule (see paper)
    24% identity, 75% coverage of query (68.6 bits)

UxaR / VIMSS4879396 UxaR regulator of Glucuronate utilization; Galacturonate utilization, effector Glucuronate; Galacturonate (repressor) from Bacteroides stercoris ATCC 43183
    25% identity, 77% coverage of query (61.2 bits)

UxaR / VIMSS4205073 UxaR regulator of Glucuronate utilization; Galacturonate utilization, effector Glucuronate; Galacturonate (repressor) from Bacteroides ovatus ATCC 8483
    21% identity, 75% coverage of query (51.6 bits)

RBSB_BACSU / P36949 Ribose import binding protein RbsB from Bacillus subtilis (strain 168) (see 2 papers)
    25% identity, 77% coverage of query (47.4 bits)

2ioyA / Q8RD41 Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
    24% identity, 71% coverage of query (46.6 bits)

4wutA / B9K0B2 Crystal structure of an abc transporter solute binding protein (ipr025997) from agrobacterium vitis (avi_5133, target efi-511220) with bound d-fucose
    20% identity, 73% coverage of query (46.2 bits)

3ksmA / Q2S7D2 Crystal structure of abc-type sugar transport system, periplasmic component from hahella chejuensis
    19% identity, 72% coverage of query (45.8 bits)

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