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Searching for up to 100 curated homologs for HSERO_RS18800 FitnessBrowser__HerbieS:HSERO_RS18800 (293 a.a.)

Found high-coverage hits (≥70%) to 10 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

7x8eA Crystal structure of pfhppd-y13287 complex
    34% identity, 88% coverage of query (132 bits)

7xntA Crystal structure of pfhppd-y13161 complex
    34% identity, 88% coverage of query (132 bits)

Psest_3514 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri RCH2
    32% identity, 90% coverage of query (130 bits)

Ac3H11_1849 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Acidovorax sp. GW101-3H11
    36% identity, 71% coverage of query (130 bits)

AO356_22845 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens FW300-N2C3
    33% identity, 88% coverage of query (125 bits)

Build an alignment

Build an alignment for HSERO_RS18800 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

LLY_LEGPC / P69053 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC 1.13.11.27 from Legionella pneumophila (strain Corby) (see paper)
    28% identity, 87% coverage of query (102 bits)

DSD_PSEAE / Q9I6P6 3-dehydroshikimate dehydratase; DSD; EC 4.2.1.118 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    32% identity, 84% coverage of query (101 bits)

Q09PG8 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from uncultured soil bacterium (see paper)
    29% identity, 86% coverage of query (100 bits)

5hmqD / Q88JU3 Xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein
    31% identity, 71% coverage of query (99.0 bits)

DSD_PSEPK / Q88JU3 3-dehydroshikimate dehydratase; DSD; EC 4.2.1.118 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
    31% identity, 71% coverage of query (97.8 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory