Searching for up to 100 curated homologs for HSERO_RS19360 FitnessBrowser__HerbieS:HSERO_RS19360 (391 a.a.)
Found high-coverage hits (≥70%) to 5 curated proteins.
Removed hits that are identical to the query, leaving 4
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
SMa0247 2-dehydro-3-deoxy-D-arabinonate dehydratase, 2,4-dioxopentanoate forming from Sinorhizobium meliloti 1021
59% identity, 99% coverage of query (449 bits)
Ga0059261_1895 2-keto-3-deoxyxylonate dehydratase (EC 4.2.1.141) from Sphingomonas koreensis DSMZ 15582
57% identity, 97% coverage of query (423 bits)
CCNA_00866 2-keto-3-deoxyxylonate dehydratase XylX (EC 4.2.1.141) from Caulobacter crescentus NA1000
xylX / A0A0H3C4T2 2-dehydro-3-deoxy-D-arabinonate dehydratase (EC 4.2.1.141) from Caulobacter vibrioides (strain NA1000 / CB15N) (see 7 papers)
55% identity, 97% coverage of query (403 bits)
Build an alignment for HSERO_RS19360 and 3 homologs with ≥ 30% identity
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xacE / D4GP28 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43; EC 4.2.1.141) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see 3 papers)
KDXD_HALVD / D4GP28 Probable 2-keto-3-deoxyxylonate dehydratase; KDXD; EC 4.2.1.141 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see 2 papers)
25% identity, 82% coverage of query (90.5 bits)
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Lawrence Berkeley National Laboratory