Sites on a Tree


Searching for up to 100 curated homologs for HSERO_RS22800 FitnessBrowser__HerbieS:HSERO_RS22800 (237 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

A0A2H4PJM1 gluconate 2-dehydrogenase (subunit 3/3) (EC from Pseudomonas plecoglossicida (see paper)
    45% identity, 81% coverage of query (169 bits)

gadh3 / Q4KKM8 D-gluconate dehydrogenase 21.7 kD subunit (EC from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) (see paper)
    42% identity, 83% coverage of query (156 bits)

Build an alignment

Build an alignment for HSERO_RS22800 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory