Sites on a Tree

 

Searching for up to 100 curated homologs for LU632_RS20445 (67 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

YjiX / b4353 PF04328 family protein YjiX from Escherichia coli K-12 substr. MG1655 (see paper)
    70% identity, 100% coverage of query (110 bits)

YbdD / b4512 PF04328 family protein YbdD from Escherichia coli K-12 substr. MG1655 (see paper)
    61% identity, 100% coverage of query (88.6 bits)

RR42_RS20510 small component of pyruvate transporter (ybdD-like) from Cupriavidus basilensis FW507-4G11
    58% identity, 100% coverage of query (82.0 bits)

Build an alignment

Build an alignment for LU632_RS20445 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory