Searching for up to 100 curated homologs for MMJJ_RS07505 (57 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

RPO6_SACSH / B8YB61 DNA-directed RNA polymerase subunit Rpo6; DNA-directed RNA polymerase subunit K; EC 2.7.7.6 from Saccharolobus shibatae (strain ATCC 51178 / DSM 5389 / JCM 8931 / NBRC 15437 / B12) (Sulfolobus shibatae) (see 3 papers)
B8YB61 DNA-directed RNA polymerase (subunit 5/13) (EC 2.7.7.6) from Saccharolobus shibatae (see 2 papers)
    42% identity, 98% coverage of query (53.5 bits)

RPO6_SACS2 / Q97ZJ9 DNA-directed RNA polymerase subunit Rpo6; DNA-directed RNA polymerase subunit K; EC 2.7.7.6 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
Q97ZJ9 DNA-directed RNA polymerase (subunit 5/13) (EC 2.7.7.6) from Saccharolobus solfataricus (see paper)
    39% identity, 98% coverage of query (52.0 bits)

RPB6B_ARATH / Q9SJ96 DNA-directed RNA polymerases II and V subunit 6B from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    42% identity, 89% coverage of query (48.5 bits)

RPD6A_ARATH / Q9FJ98 DNA-directed RNA polymerases II, IV and V subunit 6A; RNA polymerase Rpb6 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    42% identity, 89% coverage of query (48.5 bits)

RPO6_SULAC / P39463 DNA-directed RNA polymerase subunit Rpo6; DNA-directed RNA polymerase subunit K; EC 2.7.7.6 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see 2 papers)
    41% identity, 98% coverage of query (47.8 bits)

rpb6 / GI|3130047 DNA-directed RNA polymerase I, II and III subunit Rpb6 from Schizosaccharomyces pombe (see 2 papers)
rpb6 / AAA52084.1 RNA polymerase small common phosphorylated subunit from Schizosaccharomyces pombe (see paper)
    44% identity, 89% coverage of query (46.2 bits)

RPO26 DNA-directed RNA polymerases I from Candida albicans (see paper)
    42% identity, 89% coverage of query (44.7 bits)

RPAB2_YEAST / P20435 DNA-directed RNA polymerases I, II, and III subunit RPABC2; RNA polymerases I, II, and III subunit ABC2; ABC23; DNA-directed RNA polymerases I, II, and III 23 kDa polypeptide from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 11 papers)
    40% identity, 89% coverage of query (43.9 bits)

O88828 DNA-directed RNA polymerases I, II, and III subunit RPABC2; RNA polymerases I, II, and III subunit ABC2; DNA-directed RNA polymerase II subunit F; RPB6 homolog from Rattus norvegicus (Rat)
    40% identity, 89% coverage of query (42.4 bits)

Build an alignment

Build an alignment for MMJJ_RS07505 and 9 homologs with ≥ 30% identity

Or download the sequences

No additional hits (below 30% identity) were found

Or start over