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Searching for up to 100 curated homologs for N515DRAFT_0956 FitnessBrowser__Dyella79:N515DRAFT_0956 (428 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

lhpE / Q9I478 D-hydroxyproline dehydrogenase α subunit from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    52% identity, 97% coverage of query (278 bits)

hcnB / O85227 hydrogen cyanide synthase HcnB subunit (EC 1.4.99.5) from Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0) (see paper)
HCNB_PSEPH / O85227 Hydrogen cyanide synthase subunit HcnB; HcnB; Glycine dehydrogenase (cyanide-forming); EC 1.4.99.5 from Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0) (see 3 papers)
    30% identity, 94% coverage of query (140 bits)

C7E716 glycine dehydrogenase (cyanide-forming) (subunit 2/3) (EC 1.4.99.5) from Pseudomonas fluorescens (see paper)
    32% identity, 85% coverage of query (140 bits)

HCNB_PSEAE / Q9I1S2 Hydrogen cyanide synthase subunit HcnB; HcnB; Glycine dehydrogenase (cyanide-forming); EC 1.4.99.5 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 5 papers)
    33% identity, 88% coverage of query (136 bits)

noxA / Q59158 nopaline oxidase subunit A from Rhizobium radiobacter (see paper)
noxA / CAA82963.1 NoxA from Agrobacterium tumefaciens (see 3 papers)
    33% identity, 91% coverage of query (114 bits)

ooxA / Q59160 octopine oxidase subunit A from Agrobacterium tumefaciens (strain Ach5) (see paper)
    30% identity, 97% coverage of query (114 bits)

Build an alignment

Build an alignment for N515DRAFT_0956 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

O50134 thioredoxin-disulfide reductase (EC 1.8.1.9) from Pyrococcus horikoshii (see paper)
    26% identity, 71% coverage of query (68.6 bits)

B6YUA8 thioredoxin-disulfide reductase (EC 1.8.1.9) from Thermococcus onnurineus (see paper)
    27% identity, 71% coverage of query (68.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory