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Searching for up to 100 curated homologs for N515DRAFT_1894 FitnessBrowser__Dyella79:N515DRAFT_1894 (543 a.a.)

Found high-coverage hits (≥70%) to 19 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

B0V8W9 NAD+ synthase (glutamine-hydrolysing) (EC 6.3.5.1) from Acinetobacter baumannii (see paper)
    48% identity, 100% coverage of query (524 bits)

NADE_ACIAD / Q6F8K4 Glutamine-dependent NAD(+) synthetase; NAD synthetase; NAD(+) synthase [glutamine-hydrolyzing]; EC 6.3.5.1 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see paper)
    49% identity, 100% coverage of query (522 bits)

5khaA / V5VHL3 Structure of glutamine-dependent NAD+ synthetase from acinetobacter baumannii in complex with adenosine diphosphate (adp)
    46% identity, 99% coverage of query (490 bits)

NADE_RHOCA / Q03638 Glutamine-dependent NAD(+) synthetase; NAD(+) synthase [glutamine-hydrolyzing]; EC 6.3.5.1 from Rhodobacter capsulatus (Rhodopseudomonas capsulata) (see paper)
nadE / GB|CAA42042.1 NAD(+) synthase (glutamine-hydrolyzing); EC 6.3.5.1 from Rhodobacter capsulatus (see 2 papers)
    49% identity, 99% coverage of query (454 bits)

Build an alignment

Build an alignment for N515DRAFT_1894 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

D8IS59 NAD+ synthase (glutamine-hydrolysing) (EC 6.3.5.1) from Herbaspirillum seropedicae (see paper)
    27% identity, 87% coverage of query (134 bits)

NADE_MYCTU / P9WJJ3 Glutamine-dependent NAD(+) synthetase; NAD(+) synthase [glutamine-hydrolyzing]; EC 6.3.5.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 4 papers)
P9WJJ3 NAD+ synthase (glutamine-hydrolysing) (EC 6.3.5.1) from Mycobacterium tuberculosis (see paper)
nadE NAD(+) synthase (glutamine-hydrolyzing); EC 6.3.5.1 from Mycobacterium tuberculosis (see 3 papers)
    27% identity, 79% coverage of query (133 bits)

3sytA Crystal structure of glutamine-dependent NAD+ synthetase from m. Tuberculosis bound to amp/ppi, NAD+, and glutamate
    27% identity, 79% coverage of query (128 bits)

6ofcC Crystal structure of m. Tuberculosis glutamine-dependent NAD+ synthetase complexed with sulfonamide derivative 1, pyrophosphate, and glutamine
    27% identity, 79% coverage of query (128 bits)

3dlaA X-ray crystal structure of glutamine-dependent NAD+ synthetase from mycobacterium tuberculosis bound to naad+ and don
    27% identity, 79% coverage of query (127 bits)

6ofcB / P9WJJ3 Crystal structure of m. Tuberculosis glutamine-dependent NAD+ synthetase complexed with sulfonamide derivative 1, pyrophosphate, and glutamine (see paper)
    27% identity, 79% coverage of query (125 bits)

3seqA Crystal structure of c176a mutant of glutamine-dependent NAD+ synthetase from m. Tuberculosis in complex with ampcpp and naad+
    27% identity, 79% coverage of query (124 bits)

3sezA Crystal structure of c176a mutant of glutamine-dependent NAD+ synthetase from m. Tuberculosis in complex with atp and naad+
    27% identity, 79% coverage of query (124 bits)

3sytD Crystal structure of glutamine-dependent NAD+ synthetase from m. Tuberculosis bound to amp/ppi, NAD+, and glutamate
    27% identity, 79% coverage of query (124 bits)

3dlaB X-ray crystal structure of glutamine-dependent NAD+ synthetase from mycobacterium tuberculosis bound to naad+ and don
    27% identity, 79% coverage of query (124 bits)

3seqD / P9WJJ3 Crystal structure of c176a mutant of glutamine-dependent NAD+ synthetase from m. Tuberculosis in complex with ampcpp and naad+ (see paper)
    27% identity, 79% coverage of query (120 bits)

3sezC Crystal structure of c176a mutant of glutamine-dependent NAD+ synthetase from m. Tuberculosis in complex with atp and naad+
    27% identity, 79% coverage of query (119 bits)

NADE_DROME / Q9VYA0 Glutamine-dependent NAD(+) synthetase; NAD(+) synthase [glutamine-hydrolyzing]; EC 6.3.5.1 from Drosophila melanogaster (Fruit fly) (see paper)
    24% identity, 84% coverage of query (81.3 bits)

NADSYN1 / Q6IA69 Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) from Homo sapiens (see paper)
NADE_HUMAN / Q6IA69 Glutamine-dependent NAD(+) synthetase; NAD(+) synthase [glutamine-hydrolyzing]; NAD(+) synthetase; EC 6.3.5.1 from Homo sapiens (Human) (see 2 papers)
Q6IA69 NAD+ synthase (glutamine-hydrolysing) (EC 6.3.5.1) from Homo sapiens (see paper)
    23% identity, 83% coverage of query (73.6 bits)

6ofbA / Q6IA69 Crystal structure of human glutamine-dependent NAD+ synthetase complexed with naad+, amp, pyrophosphate, and mg2+ (see paper)
    22% identity, 83% coverage of query (71.6 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory