Sites on a Tree

 

Searching for up to 100 curated homologs for N515DRAFT_3226 FitnessBrowser__Dyella79:N515DRAFT_3226 (532 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

ABA39423.1 β-galactosidase (GalD) (EC 3.2.1.23) (see protein)
    60% identity, 95% coverage of query (625 bits)

7kmoA / Q8PLM3 Crystal structure of the gh35 beta-galactosidase (xac1772) from xanthomonas citri in complex with galactose
    60% identity, 95% coverage of query (622 bits)

6tbjA Structure of a beta galactosidase with inhibitor
    57% identity, 95% coverage of query (615 bits)

6tbgA Structure of a beta galactosidase with inhibitor
    56% identity, 95% coverage of query (613 bits)

6tbfA Structure of a beta galactosidase with inhibitor
    56% identity, 95% coverage of query (613 bits)

6tbhA Structure of a beta galactosidase with inhibitor
    55% identity, 95% coverage of query (613 bits)

4d1jD / B3PBE0 The structure of the gh35 beta-galactosidase bgl35a from cellvibrio japonicas in complex with 1-deoxygalactonojirimycin (see paper)
    55% identity, 95% coverage of query (612 bits)

8pejA Cjgh35 with a galactosidase activity-based probe
    56% identity, 95% coverage of query (612 bits)

6tbiA Structure of a beta galactosidase with inhibitor
    55% identity, 95% coverage of query (612 bits)

5jawA Structure of a beta galactosidase with inhibitor
    56% identity, 95% coverage of query (612 bits)

6tbkA Structure of a beta galactosidase with inhibitor
    57% identity, 95% coverage of query (611 bits)

Build an alignment

Build an alignment for N515DRAFT_3226 and 11 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory