Sites on a Tree

 

Searching for up to 100 curated homologs for N515DRAFT_3725 FitnessBrowser__Dyella79:N515DRAFT_3725 (266 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BPHYT_RS07585 N-formylglutamate deformylase (EC 3.5.1.68) from Burkholderia phytofirmans PsJN
    55% identity, 96% coverage of query (287 bits)

RR42_RS16895 N-formylglutamate deformylase (EC 3.5.1.68) from Cupriavidus basilensis FW507-4G11
    53% identity, 96% coverage of query (266 bits)

Ac3H11_2548 N-formylglutamate deformylase (EC 3.5.1.68) from Acidovorax sp. GW101-3H11
    53% identity, 92% coverage of query (257 bits)

HUTG_PSEAE / Q9HU92 N-formylglutamate deformylase; N-formyl-L-glutamate deformylase; EC 3.5.1.68 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    50% identity, 97% coverage of query (237 bits)

SM_b21164 N-formylglutamate deformylase (EC 3.5.1.68) from Sinorhizobium meliloti 1021
    45% identity, 95% coverage of query (228 bits)

Pf1N1B4_1578 N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens FW300-N1B4
    46% identity, 96% coverage of query (225 bits)

AO353_12285 N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens FW300-N2E3
    46% identity, 96% coverage of query (225 bits)

AO356_09590 N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens FW300-N2C3
    46% identity, 96% coverage of query (222 bits)

hutG / O31201 N-formylglutamate amidohydrolase (EC 3.5.1.68) from Pseudomonas putida (see paper)
HUTG_PSEPU / O31201 N-formylglutamate deformylase; Formylglutamate amidohydrolase; FGase; EC 3.5.1.68 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see paper)
    48% identity, 89% coverage of query (221 bits)

Pf6N2E2_3797 N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens FW300-N2E2
    47% identity, 95% coverage of query (221 bits)

PfGW456L13_316 N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens GW456-L13
    47% identity, 91% coverage of query (220 bits)

Ga0059261_3962 N-formylglutamate deformylase (EC 3.5.1.68) from Sphingomonas koreensis DSMZ 15582
    49% identity, 86% coverage of query (216 bits)

PGA1_c36330 N-formylglutamate deformylase (EC 3.5.1.68) from Phaeobacter inhibens BS107
    41% identity, 94% coverage of query (210 bits)

Build an alignment

Build an alignment for N515DRAFT_3725 and 13 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

2q7sB / Q46VW8 Crystal structure of n-formylglutamate amidohydrolase (yp_297560.1) from ralstonia eutropha jmp134 at 2.00 a resolution
    28% identity, 95% coverage of query (86.3 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory