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Searching for up to 100 curated homologs for N515DRAFT_4319 FitnessBrowser__Dyella79:N515DRAFT_4319 (314 a.a.)

Found high-coverage hits (≥70%) to 24 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

1efpA / P38974 Electron transfer flavoprotein (etf) from paracoccus denitrificans (see paper)
    55% identity, 99% coverage of query (270 bits)

2a1uA / P13804 Crystal structure of the human etf e165betaa mutant (see paper)
    47% identity, 98% coverage of query (266 bits)

ETFA_HUMAN / P13804 Electron transfer flavoprotein subunit alpha, mitochondrial; Alpha-ETF from Homo sapiens (Human) (see 9 papers)
    47% identity, 98% coverage of query (266 bits)

ETFA_ARATH / Q9C6I6 Electron transfer flavoprotein subunit alpha, mitochondrial; Alpha-ETF from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    47% identity, 98% coverage of query (266 bits)

ETFA_MOUSE / Q99LC5 Electron transfer flavoprotein subunit alpha, mitochondrial; Alpha-ETF from Mus musculus (Mouse) (see paper)
    47% identity, 98% coverage of query (260 bits)

ETFA_RAT / P13803 Electron transfer flavoprotein subunit alpha, mitochondrial; Alpha-ETF from Rattus norvegicus (Rat) (see paper)
    47% identity, 98% coverage of query (253 bits)

ETFA_YEAST / Q12480 Probable electron transfer flavoprotein subunit alpha, mitochondrial; Alpha-ETF; Altered inheritance rate of mitochondria protein 45 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    46% identity, 78% coverage of query (209 bits)

ETFA_SYNWW / Q0AZ33 Electron transfer flavoprotein subunit alpha from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see 2 papers)
    37% identity, 100% coverage of query (172 bits)

6fahE / H6LGM8 Molecular basis of the flavin-based electron-bifurcating caffeyl-coa reductase reaction (see paper)
    38% identity, 72% coverage of query (158 bits)

CARE_ACEWD / H6LGM8 Caffeyl-CoA reductase-Etf complex subunit CarE; Electron transfer flavoprotein large subunit; ETFLS; Electron transfer flavoprotein subunit alpha; Alpha-ETF; EC 1.3.1.108 from Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) (see paper)
H6LGM8 caffeoyl-CoA reductase (subunit 1/3) (EC 1.3.1.108) from Acetobacterium woodii (see paper)
    38% identity, 72% coverage of query (158 bits)

Q18AQ5 butanoyl-CoA dehydrogenase complex (NAD+, ferredoxin) (subunit 1/3) (EC 1.3.1.109) from Clostridioides difficile (see paper)
    38% identity, 70% coverage of query (156 bits)

5ol2A / A0A125V455 The electron transferring flavoprotein/butyryl-coa dehydrogenase complex from clostridium difficile (see paper)
    38% identity, 70% coverage of query (155 bits)

D2RIQ3 butanoyl-CoA dehydrogenase complex (NAD+, ferredoxin) (subunit 2/3) (EC 1.3.1.109); short-chain acyl-CoA dehydrogenase (EC 1.3.8.1) from Acidaminococcus fermentans (see paper)
    38% identity, 70% coverage of query (146 bits)

4kpuA / D2RIQ3 Electron transferring flavoprotein of acidaminococcus fermentans: towards a mechanism of flavin-based electron bifurcation (see paper)
    38% identity, 70% coverage of query (145 bits)

7qh2A / H6LBB1 Cryo-em structure of ldh-etfab complex from acetobacterium woodii (see paper)
    31% identity, 97% coverage of query (142 bits)

LCTC_ACEWD / H6LBB1 Lactate dehydrogenase (NAD(+),ferredoxin) subunit LctC; Electron transfer flavoprotein large subunit; Electron transfer flavoprotein subunit alpha; EtfA; Lactate dehydrogenase-Etf complex subunit LctC; EC 1.1.1.436 from Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) (see paper)
H6LBB1 lactate dehydrogenase (NAD+, ferredoxin) (subunit 2/3) (EC 1.3.1.110) from Acetobacterium woodii (see paper)
    31% identity, 97% coverage of query (141 bits)

5ow0A / Q39VG4 Crystal structure of an electron transfer flavoprotein from geobacter metallireducens (see paper)
    39% identity, 73% coverage of query (140 bits)

7koeB / R4P3F4 Electron bifurcating flavoprotein fix/etfabcx (see paper)
    34% identity, 97% coverage of query (128 bits)

acrA / G3KIM6 electron-transferring flavoprotein α subunit from Anaerotignum propionicum (see paper)
ETFA_ANAPI / G3KIM6 Acryloyl-CoA reductase electron transfer subunit beta; Electron transfer flavoprotein large subunit; ETFLS; Electron transfer flavoprotein subunit beta; Beta-ETF from Anaerotignum propionicum (Clostridium propionicum) (see paper)
G3KIM6 acrylyl-CoA reductase (NADH) (EC 1.3.1.95) from Anaerotignum propionicum (see paper)
    30% identity, 99% coverage of query (126 bits)

YaaR / b0042 putative electron transfer flavoprotein FixB from Escherichia coli K-12 substr. MG1655 (see 7 papers)
FIXB_ECOLI / P31574 Protein FixB from Escherichia coli (strain K12) (see paper)
    38% identity, 72% coverage of query (121 bits)

ETFA_METME / P53571 Electron transfer flavoprotein subunit alpha; Alpha-ETF; Electron transfer flavoprotein large subunit; ETFLS from Methylophilus methylotrophus (Bacterium W3A1) (see 2 papers)
AAA64953.1 electron transfer flavoprotein large subunit from Methylophilus methylotrophus W3A1 (see paper)
    32% identity, 100% coverage of query (118 bits)

3clrD / P53571 Crystal structure of the r236a etf mutant from m. Methylotrophus (see paper)
    32% identity, 99% coverage of query (112 bits)

YdiR / b1698 putative electron transfer flavoprotein subunit YdiR from Escherichia coli K-12 substr. MG1655 (see 3 papers)
    31% identity, 70% coverage of query (108 bits)

YgcQ / b2769 putative flavoprotein from Escherichia coli K-12 substr. MG1655 (see paper)
    32% identity, 70% coverage of query (84.7 bits)

Build an alignment

Build an alignment for N515DRAFT_4319 and 24 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory