Sites on a Tree

 

Searching for up to 100 curated homologs for NIAGMN_27125 (50 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

YdfA / b1571 Qin prophage; DUF1391 domain-containing protein YdfA from Escherichia coli K-12 substr. MG1655 (see paper)
    86% identity, 98% coverage of query (90.9 bits)

YdaF / b4527 Rac prophage; DUF1391 domain-containing protein YdaF from Escherichia coli K-12 substr. MG1655
    78% identity, 98% coverage of query (84.0 bits)

Build an alignment

Build an alignment for NIAGMN_27125 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory