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Searching for up to 100 curated homologs for NP_350163.1 NCBI__GCF_000008765.1:NP_350163.1 (355 a.a.)

Found high-coverage hits (≥70%) to 18 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

fabX / O25465 decanoate oxidase (EC 1.3.3.6; EC 5.3.3.14) from Helicobacter pylori (strain ATCC 700392 / 26695) (see 2 papers)
    40% identity, 97% coverage of query (250 bits)

7e1qA / A0A0B2E3F3 Crystal structure of dehydrogenase/isomerase fabx from helicobacter pylori (see paper)
    40% identity, 97% coverage of query (249 bits)

7e1sC Crystal structure of dehydrogenase/isomerase fabx from helicobacter pylori in complex with octanoyl-acp
    40% identity, 97% coverage of query (249 bits)

7e1sA Crystal structure of dehydrogenase/isomerase fabx from helicobacter pylori in complex with octanoyl-acp
    40% identity, 97% coverage of query (249 bits)

7e1rA Crystal structure of dehydrogenase/isomerase fabx from helicobacter pylori in complex with holo-acp
    40% identity, 97% coverage of query (249 bits)

Build an alignment

Build an alignment for NP_350163.1 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

7l00C / A0A031WIF2 Crystal structure of c. Difficile enoyl-acyl carrier protein reductase (fabk) in complex with an inhibitor
    27% identity, 95% coverage of query (109 bits)

fabK / D4YGY7 enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.9) from Aerococcus viridans (strain ATCC 11563 / DSM 20340 / CCUG 4311 / JCM 20461 / NBRC 12219 / NCTC 8251 / M1) (see paper)
    26% identity, 96% coverage of query (94.0 bits)

5gvhA / Q9WZQ7 Structure of fabk from thermotoga maritima (see paper)
    26% identity, 96% coverage of query (89.0 bits)

fabK / Q9FBC5 enoyl-[acyl-carrier-protein] reductase (NADH) monomer (EC 1.3.1.9) from Streptococcus pneumoniae (see 8 papers)
fabK / AAF98273.1 trans-2-enoyl-ACP reductase II from Streptococcus pneumoniae (see paper)
    25% identity, 96% coverage of query (74.7 bits)

2z6iB / Q9FBC5 Crystal structure of s. Pneumoniae enoyl-acyl carrier protein reductase (fabk) (see paper)
    25% identity, 96% coverage of query (74.7 bits)

Q8DR17 enoyl-[acyl-carrier-protein] reductase (NADH) (EC 1.3.1.9) from Streptococcus pneumoniae (see 2 papers)
    27% identity, 76% coverage of query (74.3 bits)

fabK / Q7MAW0 enoyl-[acyl-carrier-protein] reductase II (NADPH) monomer (EC 1.3.1.10) from Porphyromonas gingivalis (strain ATCC BAA-308 / W83) (see 3 papers)
Q7MAW0 enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (EC 1.3.1.10); enoyl-[acyl-carrier-protein] reductase (NADPH, Re-specific) (EC 1.3.1.39) from Porphyromonas gingivalis (see 2 papers)
4iqlA / Q7MAW0 Crystal structure of porphyromonas gingivalis enoyl-acp reductase ii (fabk) with cofactors NADPH and fmn (see paper)
    29% identity, 94% coverage of query (73.6 bits)

2z6jA Crystal structure of s. Pneumoniae enoyl-acyl carrier protein reductase (fabk) in complex with an inhibitor
    25% identity, 96% coverage of query (68.2 bits)

NMO_PSEAE / Q9HWH9 Nitronate monooxygenase; NMO; Propionate 3-nitronate monooxygenase; P3N monooxygenase; EC 1.13.12.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 3 papers)
Q9HWH9 nitronate monooxygenase (EC 1.13.12.16) from Pseudomonas aeruginosa (see 2 papers)
4q4kA / Q9HWH9 Crystal structure of nitronate monooxygenase from pseudomonas aeruginosa pao1 (see paper)
    25% identity, 74% coverage of query (66.2 bits)

NMO_PSESP / D0V3Y4 Nitronate monooxygenase; NMO; Propionate 3-nitronate monooxygenase; P3N monooxygenase; EC 1.13.12.- from Pseudomonas sp. (see paper)
    25% identity, 75% coverage of query (65.1 bits)

4qitA Crystal structure of nitroalkane oxidase from pseudomonas aeruginosa in mutant complex form
    24% identity, 74% coverage of query (62.8 bits)

5lsmA / Q8EJJ2 Crystal structure of nitronate monooxygenase (so_0471) from shewanella oneidensis mr-1
    25% identity, 75% coverage of query (62.0 bits)

4qiuB Crystal structure of nitroalkane oxidase from pseudomonas aeruginosa in mutant complex form
    24% identity, 74% coverage of query (62.0 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory