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Searching for up to 100 curated homologs for OH686_13630 (78 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

8cd1X / Q9HTN8 8cd1X (see paper)
    92% identity, 97% coverage of query (147 bits)

RpmB / b3637 50S ribosomal subunit protein L28 from Escherichia coli K-12 substr. MG1655 (see 39 papers)
rpmB / P0A7M2 50S ribosomal subunit protein L28 from Escherichia coli (strain K12) (see 35 papers)
RL28_ECOLI / P0A7M2 Large ribosomal subunit protein bL28; 50S ribosomal protein L28 from Escherichia coli (strain K12) (see 7 papers)
rpmB / RF|NP_418094 50S ribosomal protein L28 from Escherichia coli K12 (see paper)
    84% identity, 99% coverage of query (134 bits)

8a3lw / P0A7M2 8a3lw (see paper)
    84% identity, 97% coverage of query (132 bits)

8rd8WD / A0A0M4T6Y7 8rd8WD (see paper)
    83% identity, 97% coverage of query (132 bits)

8cgvw Tiamulin bound to the 50s subunit
    84% identity, 97% coverage of query (132 bits)

7uvxW 7uvxW (see paper)
    76% identity, 100% coverage of query (129 bits)

7uvyW 50S ribosomal protein L2
    75% identity, 99% coverage of query (127 bits)

7jilX / A0A1B2U1R1 7jilX (see paper)
    47% identity, 95% coverage of query (71.6 bits)

5mmiY / P82245 Structure of the large subunit of the chloroplast ribosome (see paper)
    49% identity, 83% coverage of query (69.3 bits)

RK28_SPIOL / P82245 Large ribosomal subunit protein bL28c; 50S ribosomal protein L28, chloroplastic; CL28 from Spinacia oleracea (Spinach) (see 2 papers)
    49% identity, 83% coverage of query (69.3 bits)

4v61BY 4v61BY (see paper)
    46% identity, 83% coverage of query (67.8 bits)

RK28_ARATH / O22795 Large ribosomal subunit protein bL28c; 50S ribosomal protein L28, chloroplastic; CL28 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    46% identity, 83% coverage of query (65.9 bits)

8fmwAZ / O51325 8fmwAZ (see paper)
    34% identity, 88% coverage of query (47.8 bits)

5mrcS / P36525 of the yeast mitochondrial ribosome - Class A (see paper)
    35% identity, 76% coverage of query (44.3 bits)

Build an alignment

Build an alignment for OH686_13630 and 14 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory