Searching for up to 100 curated homologs for OHPLBJKB_00404 (38 a.a.)

Found high-coverage hits (≥70%) to 28 curated proteins.

Removed hits that are identical to the query, leaving 26

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

8cd16 / Q9HWF6 8cd16 (see paper)
    87% identity, 100% coverage of query (72.4 bits)

7unr8 30S ribosomal protein S6
    87% identity, 100% coverage of query (72.4 bits)

7m4v3 / B7IA18 A. Baumannii ribosome-eravacycline complex: 50s (see paper)
    76% identity, 100% coverage of query (63.9 bits)

8rd8ep / A0A0M4U3Z5 8rd8ep (see paper)
    66% identity, 100% coverage of query (56.6 bits)

4v61B6 4v61B6 (see paper)
    71% identity, 100% coverage of query (55.8 bits)

7nhk8 / A0A1B4XKT9 7nhk8 (see paper)
    63% identity, 100% coverage of query (53.5 bits)

7ood2 / P52864 Mycoplasma pneumoniae 50s subunit of ribosomes in chloramphenicol- treated cells (see paper)
    66% identity, 100% coverage of query (50.1 bits)

RL36_DEIRA / Q9RSK0 Large ribosomal subunit protein bL36; 50S ribosomal protein L36 from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) (see 6 papers)
3cf54 / Q9RSK0 Thiopeptide antibiotic thiostrepton bound to the large ribosomal subunit of deinococcus radiodurans (see paper)
    68% identity, 100% coverage of query (49.3 bits)

2zjp4 Thiopeptide antibiotic nosiheptide bound to the large ribosomal subunit of deinococcus radiodurans
    68% identity, 100% coverage of query (49.3 bits)

RL36_THET8 / Q5SHR2 Large ribosomal subunit protein bL36; 50S ribosomal protein L36; Ribosomal protein B from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
RL36_THETH / P80256 Large ribosomal subunit protein bL36; 50S ribosomal protein L36; Ribosomal protein B from Thermus thermophilus (see paper)
    63% identity, 100% coverage of query (48.1 bits)

1vy4B9 50S ribosomal protein L36
    63% identity, 100% coverage of query (48.1 bits)

1dfeA Nmr structure of ribosomal protein l36 from thermus thermophilus
    63% identity, 100% coverage of query (48.1 bits)

5li08 50S ribosomal protein L36
    63% identity, 100% coverage of query (47.4 bits)

RTC6_NEUCR / Q7S4E7 Large ribosomal subunit protein bL36m from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (see paper)
    48% identity, 100% coverage of query (46.6 bits)

3j6b0 / O14464 of the yeast mitochondrial large ribosomal subunit (see paper)
    53% identity, 100% coverage of query (46.2 bits)

RTC6_YEAST / O14464 Large ribosomal subunit protein bL36m; 54S ribosomal protein RTC6, mitochondrial; Restriction of telomere capping protein 6; Translation associated element 4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 6 papers)
    53% identity, 100% coverage of query (45.8 bits)

6ywe0 / Q7S4E7 structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state (see paper)
    48% identity, 100% coverage of query (45.8 bits)

4v8hB9 structure of HPF bound to the 70S ribosome.
    62% identity, 97% coverage of query (45.8 bits)

6ywx0 structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site
    48% identity, 100% coverage of query (45.8 bits)

RTC6_SCHPO / O94690 Large ribosomal subunit protein bL36m; 54S ribosomal protein rtc6, mitochondrial from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    53% identity, 100% coverage of query (45.4 bits)

RL36_BACSU / P20278 Large ribosomal subunit protein bL36; 50S ribosomal protein L36; BL38; Ribosomal protein B; Ribosomal protein II from Bacillus subtilis (strain 168) (see paper)
7as8j / P20278 Bacillus subtilis ribosome quality control complex state b. Ribosomal 50s subunit with p-tRNA, rqch, and rqcp/yabo (see paper)
    58% identity, 100% coverage of query (45.1 bits)

RK36_ANTAG / Q85AL7 Large ribosomal subunit protein bL36c; 50S ribosomal protein L36, chloroplastic from Anthoceros angustus (Hornwort) (Anthoceros formosae) (see 2 papers)
    55% identity, 100% coverage of query (44.7 bits)

9c4g3 / A0A2B7JN22 Cutibacterium acnes 50s ribosomal subunit with clindamycin bound (see paper)
    58% identity, 100% coverage of query (44.7 bits)

5o61f complete structure of the Mycobacterium smegmatis 70S ribosome
    55% identity, 100% coverage of query (43.9 bits)

6z1pAG / W7XH61 6z1pAG (see paper)
    47% identity, 100% coverage of query (42.7 bits)

5aj4B9 of the 55S mammalian mitoribosome. (see paper)
    49% identity, 97% coverage of query (40.4 bits)

Build an alignment

Build an alignment for OHPLBJKB_00404 and 26 homologs with ≥ 30% identity

Or download the sequences

No additional hits (below 30% identity) were found

Or start over