Searching for up to 100 curated homologs for PFR28_05003 (73 a.a.)

Found high-coverage hits (≥70%) to 26 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

8cd1Le / Q9HUD0 8cd1Le (see paper)
    65% identity, 93% coverage of query (101 bits)

RL31_STRCO / Q9K4E5 Large ribosomal subunit protein bL31; 50S ribosomal protein L31 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
    59% identity, 99% coverage of query (88.6 bits)

RpmE / b3936 50S ribosomal subunit protein L31 from Escherichia coli K-12 substr. MG1655 (see 22 papers)
rpmE / P0A7M9 50S ribosomal subunit protein L31 from Escherichia coli (strain K12) (see 26 papers)
RL31_ECOLI / P0A7M9 Large ribosomal subunit protein bL31; 50S ribosomal protein L31 from Escherichia coli (strain K12) (see 8 papers)
5akaZ / P0A7M9 Em structure of ribosome-srp-ftsy complex in closed state (see paper)
    54% identity, 95% coverage of query (86.7 bits)

6yst6 of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
    55% identity, 89% coverage of query (85.9 bits)

5afi6 Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM
    55% identity, 89% coverage of query (85.9 bits)

5zeb2 / A0R215 5zeb2 (see paper)
    58% identity, 89% coverage of query (84.3 bits)

9c4g4 / A0A2B7JUW7 Cutibacterium acnes 50s ribosomal subunit with clindamycin bound (see paper)
    59% identity, 89% coverage of query (82.8 bits)

8crx4 30S ribosomal protein S17
    59% identity, 89% coverage of query (82.8 bits)

RL31_BACSU / Q03223 Large ribosomal subunit protein bL31; 50S ribosomal protein L31 from Bacillus subtilis (strain 168) (see 3 papers)
    46% identity, 89% coverage of query (70.1 bits)

3j9wB3 / Q03223 3j9wB3 (see paper)
    46% identity, 89% coverage of query (69.7 bits)

RL31_THET8 / Q5SJE1 Large ribosomal subunit protein bL31; 50S ribosomal protein L31 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
5a9zAa / Q5SJE1 of Thermous thermophilus ribosome bound to BipA-GDPCP (see paper)
    48% identity, 89% coverage of query (69.7 bits)

1vy4B4 50S ribosomal protein L36
    48% identity, 89% coverage of query (69.7 bits)

7msc6 / P9WHA1 70SIC in complex with MtbEttA at Pre_R0 state (see paper)
    50% identity, 89% coverage of query (68.9 bits)

RL31_RHOPA / Q6NBB0 Large ribosomal subunit protein bL31; 50S ribosomal protein L31; RRP-L31 from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (see paper)
    44% identity, 92% coverage of query (67.4 bits)

5o61g / A0R215 complete structure of the Mycobacterium smegmatis 70S ribosome (see paper)
    50% identity, 89% coverage of query (66.6 bits)

6o8z1 / A0A1B4XMV6 6o8z1 (see paper)
    39% identity, 89% coverage of query (57.0 bits)

7nhn4 / P0A485 7nhn4 (see paper)
    41% identity, 89% coverage of query (55.5 bits)

YkgM / b0296 50S ribosomal subunit protein L31B from Escherichia coli K-12 substr. MG1655 (see 8 papers)
RL31B_ECOLI / P0A7N1 Large ribosomal subunit protein bL31B; 50S ribosomal protein L31 type B from Escherichia coli (strain K12) (see 3 papers)
    36% identity, 99% coverage of query (55.5 bits)

5myjB3 / A2RJP7 of 70S ribosome from Lactococcus lactis (see paper)
    35% identity, 89% coverage of query (53.1 bits)

RL31_DEIRA / Q9RW44 Large ribosomal subunit protein bL31; 50S ribosomal protein L31 from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) (see 6 papers)
1nkwY / Q9RW44 Crystal structure of the large ribosomal subunit from deinococcus radiodurans (see paper)
    40% identity, 89% coverage of query (50.8 bits)

7nhl4 / Q2FWD8 7nhl4 (see paper)
    41% identity, 82% coverage of query (49.7 bits)

5li03 / Q2FWD8 5li03 (see paper)
    37% identity, 89% coverage of query (49.3 bits)

8p7yx 50S ribosomal protein L31
    39% identity, 89% coverage of query (48.9 bits)

RL31B_BACSU / O34967 Large ribosomal subunit protein bL31B; 50S ribosomal protein L31 type B from Bacillus subtilis (strain 168) (see paper)
    32% identity, 88% coverage of query (45.8 bits)

7nhk3 / A0A1B4XMV6 7nhk3 (see paper)
    39% identity, 89% coverage of query (44.7 bits)

8uu93 / A0A0U4MT39 8uu93 (see paper)
    36% identity, 88% coverage of query (43.1 bits)

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