Searching for up to 100 curated homologs for PP_0930 FitnessBrowser__Putida:PP_0930 (481 a.a.)

Found high-coverage hits (≥70%) to 19 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

4wj3B / Q9HVT7 Crystal structure of the asparagine transamidosome from pseudomonas aeruginosa (see paper)
    84% identity, 83% coverage of query (703 bits)

P64201 glutaminyl-tRNA synthase (glutamine-hydrolysing) (subunit 1/2) (EC 6.3.5.7) from Staphylococcus aureus (see paper)
    48% identity, 100% coverage of query (470 bits)

3ip4B / P64201 The high resolution structure of gatcab (see paper)
    48% identity, 100% coverage of query (469 bits)

GATB_STAAU / Q9RF06 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Asp/Glu-ADT subunit B; EC 6.3.5.- from Staphylococcus aureus (see paper)
    48% identity, 100% coverage of query (469 bits)

gatB / O30509 glutamyl-tRNA^Gln amidotransferase subunit B (EC 6.3.5.7) from Bacillus subtilis (strain 168) (see paper)
    48% identity, 99% coverage of query (464 bits)

GATB_ARATH / Q9FV81 Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Glu-AdT subunit B; EC 6.3.5.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    48% identity, 99% coverage of query (448 bits)

3h0lB / O66766 Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus (see paper)
    49% identity, 85% coverage of query (433 bits)

3h0rH Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus
    49% identity, 85% coverage of query (433 bits)

3h0rE Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus
    49% identity, 85% coverage of query (433 bits)

3h0rB Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus
    49% identity, 85% coverage of query (433 bits)

3al0B / Q9X100 Crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. (see paper)
    44% identity, 100% coverage of query (411 bits)

2g5iB Structure of tRNA-dependent amidotransferase gatcab complexed with adp-alf4
    48% identity, 86% coverage of query (411 bits)

2df4B Structure of tRNA-dependent amidotransferase gatcab complexed with mn2+
    48% identity, 84% coverage of query (402 bits)

gatB / Q9RRD7 glutamyl-tRNA^Gln amidotransferase subunit B (EC 6.3.5.7; EC 6.3.5.6) from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) (see paper)
    40% identity, 100% coverage of query (350 bits)

GATB_HUMAN / O75879 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112 homolog; EC 6.3.5.- from Homo sapiens (Human) (see 3 papers)
O75879 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC 6.3.5.7) from Homo sapiens (see paper)
    37% identity, 99% coverage of query (328 bits)

3kfuF / Q9LCX2 Crystal structure of the transamidosome (see paper)
    42% identity, 83% coverage of query (315 bits)

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Build an alignment for PP_0930 and 16 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

GATB_SCHPO / Q9UT77 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; EC 6.3.5.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    29% identity, 99% coverage of query (245 bits)

GATB_YEAST / P33893 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112; EC 6.3.5.- from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
    31% identity, 99% coverage of query (225 bits)

C6KTC3 glutaminyl-tRNA synthase (glutamine-hydrolysing) (subunit 1/2) (EC 6.3.5.7) from Plasmodium falciparum (see paper)
    24% identity, 86% coverage of query (93.2 bits)

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