Searching for up to 100 curated homologs for PP_1001 FitnessBrowser__Putida:PP_1001 (417 a.a.)

Found high-coverage hits (≥70%) to 18 curated proteins.

Removed hits that are identical to the query, leaving 17

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

A7LKB0 arginine deiminase (EC 3.5.3.6) from Pseudomonas plecoglossicida (see 4 papers)
    96% identity, 100% coverage of query (817 bits)

P13981 arginine deiminase (EC 3.5.3.6) from Pseudomonas aeruginosa (see 4 papers)
    85% identity, 100% coverage of query (761 bits)

2a9gD / P13981 Structure of c406a arginine deiminase in complex with l-arginine (see paper)
    83% identity, 98% coverage of query (728 bits)

C1DD78 arginine deiminase (EC 3.5.3.6) from Laribacter hongkongensis (see paper)
    59% identity, 99% coverage of query (483 bits)

C1DD83 arginine deiminase (EC 3.5.3.6) from Laribacter hongkongensis (see paper)
    56% identity, 98% coverage of query (474 bits)

arcA / CAD13391.1 arginine deiminase from Lactobacillus hilgardii (see paper)
    33% identity, 97% coverage of query (227 bits)

arcA / CAA04682.1 arginine deiminase from Lactobacillus sakei (see 2 papers)
    34% identity, 97% coverage of query (226 bits)

ARCA_STRGC / A8AYL1 Arginine deiminase; ADI; Arginine dihydrolase; AD; EC 3.5.3.6 from Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288) (see paper)
    33% identity, 97% coverage of query (219 bits)

Q2HYA0 arginine deiminase (EC 3.5.3.6) from Lactococcus lactis subsp. lactis (see 2 papers)
    34% identity, 98% coverage of query (219 bits)

A0A3G2YMH7 arginine deiminase (EC 3.5.3.6) from Enterococcus faecalis (see paper)
    33% identity, 98% coverage of query (216 bits)

arcA / GI|14349116 arginine deiminase; EC 3.5.3.6 from Enterococcus faecalis (see paper)
arcA / CAC41341.1 arginine deiminase from Enterococcus faecalis (see 2 papers)
    33% identity, 98% coverage of query (214 bits)

B5XMC3 arginine deiminase (EC 3.5.3.6) from Streptococcus pyogenes (see paper)
    32% identity, 97% coverage of query (213 bits)

ARCA_STRPY / P0C0B3 Arginine deiminase; ADI; Arginine dihydrolase; AD; Streptococcal acid glycoprotein; EC 3.5.3.6 from Streptococcus pyogenes (see paper)
    32% identity, 97% coverage of query (211 bits)

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Build an alignment for PP_1001 and 13 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

1lxyA / P23793 Crystal structure of arginine deiminase covalently linked with l- citrulline (see paper)
    29% identity, 98% coverage of query (174 bits)

1s9rA Crystal structure of arginine deiminase covalently linked with a reaction intermediate
    29% identity, 98% coverage of query (174 bits)

Q8EVF6 arginine deiminase (EC 3.5.3.6) from Mycoplasma penetrans (see paper)
    26% identity, 97% coverage of query (149 bits)

3527597 / Q27657 arginine deiminase subunit (EC 3.5.3.6) from Giardia intestinalis (see paper)
Q27657 arginine deiminase (EC 3.5.3.6) from Giardia intestinalis (see 3 papers)
    23% identity, 89% coverage of query (58.2 bits)

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