Searching for up to 100 curated homologs for PP_1168 FitnessBrowser__Putida:PP_1168 (194 a.a.)
Found high-coverage hits (≥70%) to 5 curated proteins.
Removed hits that are identical to the query, leaving 4
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Ac3H11_3228 gluconate TRAP transporter, small permease component from Acidovorax sp. GW101-3H11
30% identity, 73% coverage of query (50.1 bits)
Build an alignment for PP_1168 and 1 homologs with ≥ 30% identity
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SIAQ_VIBCH / Q9KR65 Sialic acid TRAP transporter small permease protein SiaQ from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (see 2 papers)
TC 2.A.56.1.6 / B9TSN0 TRAP-type C4-dicarboxylate transport system small permease component, component of The Na+-dependent sialic acid uptake porter, SiaPQM. SiaQ and SiaM form a 1:1 stoichiometric complex from Vibrio cholerae (see paper)
27% identity, 74% coverage of query (48.1 bits)
SIAT2_HAEIF / Q4TVS0 Sialic acid TRAP transporter permease protein SiaT; N-acetylneuraminic acid permease; N-acetylneuraminic acid transporter; Neu5Ac permease from Haemophilus influenzae (see paper)
25% identity, 74% coverage of query (48.1 bits)
SIAT1_HAEIN / P44543 Sialic acid TRAP transporter permease protein SiaT; N-acetylneuraminic acid permease; N-acetylneuraminic acid transporter; Neu5Ac permease from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see paper)
TC 2.A.56.1.3 / P44543 SiaT aka Sialic acid TRAP transporter permease protein, component of Na+-dependent (smf-driven) sialic acid (N-acetyl neuraminic acid) transporter, SiaTP (Allen et al., 2005; Severi et al., 2005; Johnston et al., 2008). SiaT is also called SiaQM from Haemophilus influenzae (see 2 papers)
24% identity, 74% coverage of query (45.8 bits)
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Lawrence Berkeley National Laboratory