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Searching for up to 100 curated homologs for PP_2518 FitnessBrowser__Putida:PP_2518 (420 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

gllA / Q88JX5 gallate dioxygenase monomer (EC 1.13.11.57) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
GALA_PSEPK / Q88JX5 Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
    100% identity, 81% coverage of query (703 bits)

desB / Q5NTE5 gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
G2IKE5 gallate dioxygenase (EC 1.13.11.57) from Sphingobium sp. SYK-6 (see paper)
Q5NTE5 gallate dioxygenase (EC 1.13.11.57) from Sphingomonas paucimobilis (see paper)
desB / BAD80871.1 gallate dioxygenase from Sphingomonas paucimobilis (see 2 papers)
    59% identity, 99% coverage of query (532 bits)

3wr9A / G2IKE5 Crystal structure of the anaerobic desb-gallate complex (see paper)
    59% identity, 99% coverage of query (530 bits)

3wkuA Crystal structure of the anaerobic desb-gallate complex
    58% identity, 98% coverage of query (514 bits)

Build an alignment

Build an alignment for PP_2518 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory