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Searching for up to 100 curated homologs for PP_2831 FitnessBrowser__Putida:PP_2831 (411 a.a.)

Found high-coverage hits (≥70%) to 76 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

ENOF1_HUMAN / Q7L5Y1 Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens (Human) (see 4 papers)
    61% identity, 99% coverage of query (534 bits)

4a35A / Q7L5Y1 Crystal structure of human mitochondrial enolase superfamily member 1 (enosf1) (see paper)
    61% identity, 99% coverage of query (534 bits)

HSERO_RS05235 L-fuconate dehydratase (EC 4.2.1.68) from Herbaspirillum seropedicae SmR1
    60% identity, 97% coverage of query (521 bits)

4ip4A / Q1GLV3 Crystal structure of l-fuconate dehydratase from silicibacter sp. Tm1040 liganded with mg
    59% identity, 97% coverage of query (507 bits)

4ip5A Crystal structure of l-fuconate dehydratase from silicibacter sp. Tm1040 liganded with mg and d-erythronohydroxamate
    59% identity, 97% coverage of query (507 bits)

LGD1 / Q0QWS4 L-galactonate dehydratase (EC 4.2.1.146) from Hypocrea jecorina (see paper)
LGD1_HYPJE / Q0QWS4 L-galactonate dehydratase; EC 4.2.1.146 from Hypocrea jecorina (Trichoderma reesei) (see paper)
Q0QWS4 L-galactonate dehydratase (EC 4.2.1.146) from Trichoderma reesei (see 2 papers)
    57% identity, 99% coverage of query (481 bits)

fucD / Q8P3K2 L-fuconate dehydratase monomer (EC 4.2.1.68) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) (see paper)
FUCD_XANCP / Q8P3K2 L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) (see paper)
    56% identity, 99% coverage of query (480 bits)

G3Y683 L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger (see paper)
    56% identity, 99% coverage of query (480 bits)

1yeyC / Q8P3K2 Crystal structure of l-fuconate dehydratase from xanthomonas campestris pv. Campestris str. Atcc 33913
    56% identity, 99% coverage of query (479 bits)

2hxtA Crystal structure of l-fuconate dehydratase from xanthomonas campestris liganded with mg++ and d-erythronohydroxamate
    56% identity, 99% coverage of query (479 bits)

2hxuA Crystal structure of k220a mutant of l-fuconate dehydratase from xanthomonas campestris liganded with mg++ and l-fuconate
    56% identity, 99% coverage of query (477 bits)

Build an alignment

Build an alignment for PP_2831 and 11 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

SM_b21107 dehydratase involved in L-fucose catabolism from Sinorhizobium meliloti 1021
    29% identity, 91% coverage of query (132 bits)

4h19A / Q7CU39 Crystal structure of an enolase (mandelate racemase subgroup, target efi-502087) from agrobacterium tumefaciens, with bound mg and d- ribonohydroxamate, ordered loop
    28% identity, 93% coverage of query (129 bits)

3ck5A / Q9RKF7 Crystal structure of a racemase from streptomyces coelicolor a3(2) with bound magnesium
    27% identity, 92% coverage of query (110 bits)

ACI_STRCO / Q9RKF7 3,6-anhydro-alpha-L-galactonate cycloisomerase; AHGA cycloisomerase; EC 5.5.1.25 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
    27% identity, 92% coverage of query (106 bits)

3bjsB / Q120Q7 Crystal structure of a member of enolase superfamily from polaromonas sp. Js666
    24% identity, 89% coverage of query (97.8 bits)

2pp1A / Q8ZL58 Crystal structure of l-talarate/galactarate dehydratase from salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate (see paper)
    29% identity, 75% coverage of query (97.1 bits)

TAGAD_SALTY / Q8ZL58 L-talarate/galactarate dehydratase; TalrD/GalrD; StTGD; EC 4.2.1.156; EC 4.2.1.42 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
Q8ZL58 L-talarate dehydratase (EC 4.2.1.156); galactarate dehydratase (EC 4.2.1.42) from Salmonella enterica subsp. enterica serovar Typhimurium (see 2 papers)
    29% identity, 75% coverage of query (97.1 bits)

aci / H2IFX0 3,6-anhydro-L-galactonate cycloisomerase (EC 5.5.1.25) from Vibrio sp. (strain EJY3) (see paper)
ACI_VIBSJ / H2IFX0 3,6-anhydro-alpha-L-galactonate cycloisomerase; AHGA cycloisomerase; EC 5.5.1.25 from Vibrio sp. (strain EJY3) (see paper)
H2IFX0 3,6-anhydro-L-galactonate cycloisomerase (EC 5.5.1.25) from Vibrio sp. (see paper)
    26% identity, 77% coverage of query (96.7 bits)

A0NP48 L-lyxonate dehydratase (EC 4.2.1.176) from Roseibium aggregatum (see paper)
3stpA / A0NP48 Crystal structure of a putative galactonate dehydratase
    26% identity, 73% coverage of query (96.3 bits)

5xd8B / H2IFX0 Crystal structure analysis of 3,6-anhydro-l-galactonate cycloisomerase (see paper)
    26% identity, 77% coverage of query (95.9 bits)

2pp3A Crystal structure of l-talarate/galactarate dehydratase mutant k197a liganded with mg and l-glucarate
    28% identity, 75% coverage of query (94.7 bits)

3ozmD Crystal structure of enolase superfamily member from bordetella bronchiseptica complexed with mg, m-xylarate and l-lyxarate
    27% identity, 84% coverage of query (92.8 bits)

3ozmA / A0A0H3LT39 Crystal structure of enolase superfamily member from bordetella bronchiseptica complexed with mg, m-xylarate and l-lyxarate
    27% identity, 84% coverage of query (92.4 bits)

3sqsA / A8LS88 Crystal structure of a putative mandelate racemase/muconate lactonizing protein from dinoroseobacter shibae dfl 12
    26% identity, 73% coverage of query (91.3 bits)

lyxD / Q9I1Q2 L-lyxonate dehydratase (EC 4.2.1.176) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Q9I1Q2 L-lyxonate dehydratase (EC 4.2.1.176) from Pseudomonas aeruginosa (see paper)
    25% identity, 77% coverage of query (90.5 bits)

araD / Q97U96 D-arabinonate dehydratase subunit (EC 4.2.1.5) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (see paper)
ARAD_SACS2 / Q97U96 Arabinonate dehydratase; EC 4.2.1.5 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
Q97U96 Arabinonate dehydratase (EC 4.2.1.5) from Saccharolobus solfataricus (see paper)
    25% identity, 91% coverage of query (90.1 bits)

3op2A Crystal structure of putative mandelate racemase from bordetella bronchiseptica rb50 complexed with 2-oxoglutarate/phosphate
    26% identity, 84% coverage of query (90.1 bits)

2og9A Crystal structure of mandelate racemase/muconate lactonizing enzyme from polaromonas sp. Js666
    25% identity, 91% coverage of query (82.8 bits)

3cb3A / Q12GE3 Crystal structure of l-talarate dehydratase from polaromonas sp. Js666 complexed with mg and l-glucarate
    25% identity, 91% coverage of query (82.4 bits)

SSO26655 / Q97VG1 D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (see paper)
    21% identity, 92% coverage of query (81.6 bits)

3rcyF Crystal structure of mandelate racemase/muconate lactonizing enzyme- like protein from roseovarius sp. Tm1035
    26% identity, 74% coverage of query (72.4 bits)

3tteA / A4YVM8 Crystal structure of enolase brado_4202 (target efi-501651) from bradyrhizobium complexed with magnesium and mandelic acid
    25% identity, 80% coverage of query (70.1 bits)

3toyA Crystal structure of enolase brado_4202 (target efi-501651) from bradyrhizobium sp. Ors278 with calcium and acetate bound
    25% identity, 80% coverage of query (70.1 bits)

4e6mA / Q8ZNH1 Crystal structure of putative dehydratase protein from salmonella enterica subsp. Enterica serovar typhimurium (salmonella typhimurium)
    23% identity, 95% coverage of query (67.0 bits)

IMAND_ENTBW / A8RQK7 D-galactonate dehydratase family member CLOBOL_02770 from Enterocloster bolteae (strain ATCC BAA-613 / DSM 15670 / CCUG 46953 / JCM 12243 / WAL 16351) (Clostridium bolteae) (see paper)
    21% identity, 78% coverage of query (63.2 bits)

MAND_ENT38 / A4WA78 D-galactonate dehydratase family member Ent638_1932; D-mannonate dehydratase; EC 4.2.1.-; EC 4.2.1.8 from Enterobacter sp. (strain 638) (see paper)
    22% identity, 93% coverage of query (62.4 bits)

GAD_THETE / Q704D2 D-gluconate dehydratase; EC 4.2.1.39 from Thermoproteus tenax (see 2 papers)
gad / CAF18462.1 gluconate dehydratase from Thermoproteus tenax (see paper)
    23% identity, 76% coverage of query (62.4 bits)

G4RJQ1 gluconate dehydratase (EC 4.2.1.39) from Thermoproteus tenax (see paper)
    24% identity, 88% coverage of query (62.0 bits)

tarD / Q89FH0 D-tartrate dehydratase (EC 4.2.1.81) from Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) (see paper)
TARD_BRADU / Q89FH0 D(-)-tartrate dehydratase; EC 4.2.1.81 from Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) (see paper)
    25% identity, 75% coverage of query (60.8 bits)

IMAND_CATAD / C7PW26 D-galactonate dehydratase family member Caci_4410 from Catenulispora acidiphila (strain DSM 44928 / JCM 14897 / NBRC 102108 / NRRL B-24433 / ID139908) (see paper)
    24% identity, 96% coverage of query (59.7 bits)

3mqtE / A8H7M5 Crystal structure of a mandelate racemase/muconate lactonizing enzyme from shewanella pealeana
    23% identity, 78% coverage of query (58.9 bits)

2dw6A / Q89FH0 Crystal structure of the mutant k184a of d-tartrate dehydratase from bradyrhizobium japonicum complexed with mg++ and d-tartrate (see paper)
    25% identity, 75% coverage of query (58.9 bits)

GAD_PICTO / Q6L1T2 D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828 / KAW 2/3) (see paper)
Q6L1T2 gluconate/galactonate dehydratase (EC 4.2.1.140); gluconate dehydratase (EC 4.2.1.39) from Picrophilus torridus (see paper)
    22% identity, 76% coverage of query (58.5 bits)

4e5tA Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme (target psi-200750) from labrenzia alexandrii dfl- 11
    24% identity, 77% coverage of query (58.2 bits)

4il2B / Q8FHC7 Crystal structure of d-mannonate dehydratase (rspa) from e. Coli cft073 (efi target efi-501585)
    23% identity, 93% coverage of query (58.2 bits)

MAND_PECCP / C6D9S0 D-galactonate dehydratase family member PC1_0802; D-mannonate dehydratase; EC 4.2.1.-; EC 4.2.1.8 from Pectobacterium carotovorum subsp. carotovorum (strain PC1) (see paper)
    22% identity, 93% coverage of query (58.2 bits)

3sjnA / A8H9D1 Crystal structure of enolase spea_3858 (target efi-500646) from shewanella pealeana with magnesium bound
    21% identity, 79% coverage of query (58.2 bits)

MAND_ECOL6 / Q8FHC7 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
    23% identity, 93% coverage of query (58.2 bits)

YidU / b4478 D-galactonate dehydratase (EC 4.2.1.140; EC 4.2.1.6) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
dgoD / Q6BF17 D-galactonate dehydratase (EC 4.2.1.140) from Escherichia coli (strain K12) (see 5 papers)
DGOD_ECOLI / Q6BF17 D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli (strain K12) (see 3 papers)
Q6BF17 galactonate dehydratase (EC 4.2.1.6) from Escherichia coli (see paper)
dgoD / RF|YP_026237 D-galactonate dehydratase; EC 4.2.1.6 from Escherichia coli K12 (see 6 papers)
    21% identity, 75% coverage of query (57.8 bits)

4kemA / D3P639 Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site
    25% identity, 75% coverage of query (57.4 bits)

3tcsB / Q161M1 Crystal structure of a putative racemase from roseobacter denitrificans
    25% identity, 78% coverage of query (57.4 bits)

RspA / b1581 mandelate racemase/muconate lactonizing enzyme family protein RspA from Escherichia coli K-12 substr. MG1655 (see 5 papers)
RSPA_ECOLI / P38104 Starvation-sensing protein RspA from Escherichia coli (strain K12) (see 2 papers)
rspA / RF|NP_416098 starvation-sensing protein rspA from Escherichia coli K12 (see 6 papers)
    23% identity, 93% coverage of query (57.0 bits)

MAND_SALG2 / B5RAG0 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Salmonella gallinarum (strain 287/91 / NCTC 13346) (see paper)
    23% identity, 93% coverage of query (56.6 bits)

MAND_ESCAT / B1ELW6 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Escherichia albertii (strain TW07627) (see paper)
    22% identity, 93% coverage of query (56.2 bits)

3thuA / Q1NAJ2 Crystal structure of an enolase from sphingomonas sp. Ska58 (efi target efi-501683) with bound mg
    24% identity, 85% coverage of query (56.2 bits)

MAND_SPHSS / Q1NAJ2 D-mannonate dehydratase; ManD; EC 4.2.1.8 from Sphingomonas sp. (strain SKA58) (see paper)
    24% identity, 85% coverage of query (56.2 bits)

3u4fA / A3SMJ4 Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from roseovarius nubinhibens
    24% identity, 77% coverage of query (55.8 bits)

2o56A / Q8ZKY6 Crystal structure of a member of the enolase superfamily from salmonella typhimurium
    22% identity, 91% coverage of query (54.7 bits)

DGD_STRBB / D7BPX0 D-galactonate dehydratase family member SBI_01856; D-gluconate dehydratase; EC 4.2.1.-; EC 4.2.1.39 from Streptomyces bingchenggensis (strain BCW-1) (see paper)
    23% identity, 93% coverage of query (54.3 bits)

MAND_ECOMS / D8ADB5 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Escherichia coli (strain MS 21-1) (see paper)
    23% identity, 93% coverage of query (53.5 bits)

2ox4C / Q5NN22 Crystal structure of putative dehydratase from zymomonas mobilis zm4
    22% identity, 86% coverage of query (53.5 bits)

BPHYT_RS16405 galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans PsJN
    22% identity, 93% coverage of query (53.1 bits)

MENC_GEOKU / B1A612 o-succinylbenzoate synthase; OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; N-acylamino acid racemase; NAAAR; N-succinylamino acid racemase; NSAAR; NSAR; o-succinylbenzoic acid synthase; EC 4.2.1.113; EC 5.1.1.- from Geobacillus kaustophilus (see paper)
    25% identity, 76% coverage of query (52.4 bits)

MAND_CELJU / B3PDB1 D-galactonate dehydratase family member RspA; D-mannonate dehydratase; Starvation sensing protein RspA homolog; EC 4.2.1.-; EC 4.2.1.8 from Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) (see paper)
    22% identity, 92% coverage of query (52.0 bits)

IMAND_STRSH / B5GCP6 D-galactonate dehydratase family member SSBG_02010 from Streptomyces sp. (strain SPB074) (see paper)
    21% identity, 95% coverage of query (51.6 bits)

3tjiA / A4W7D6 Crystal structure of an enolase from enterobacter sp. 638 (efi target efi-501662) with bound mg
    19% identity, 90% coverage of query (51.2 bits)

A4W7D6 D-galactonate dehydratase family member Ent638_0932 from Enterobacter sp. (strain 638)
    19% identity, 90% coverage of query (51.2 bits)

3v3wA / B3PDB1 Crystal structure of an enolase from the soil bacterium cellvibrio japonicus (target efi-502161) with bound mg and glycerol
    22% identity, 92% coverage of query (49.7 bits)

MAND_STRS3 / D9UNB2 D-galactonate dehydratase family member SSLG_02014; D-mannonate dehydratase; EC 4.2.1.-; EC 4.2.1.8 from Streptomyces sp. (strain SPB78) (see paper)
    21% identity, 95% coverage of query (48.5 bits)

IMAND_PAESJ / C6CVY9 D-galactonate dehydratase family member Pjdr2_1176 from Paenibacillus sp. (strain JDR-2) (see paper)
    21% identity, 92% coverage of query (47.4 bits)

2qjnA Crystal structure of d-mannonate dehydratase from novosphingobium aromaticivorans complexed with mg and 2-keto-3-deoxy-d-gluconate
    21% identity, 90% coverage of query (47.0 bits)

MAND2_CAUSK / B0T4L2 D-mannonate dehydratase Caul1835; ManD; EC 4.2.1.8 from Caulobacter sp. (strain K31) (see paper)
    24% identity, 85% coverage of query (46.6 bits)

4k1wA Crystal structure of the a314p mutant of mannonate dehydratase from novosphingobium aromaticivorans complexed with mg and d-mannonate
    21% identity, 90% coverage of query (46.6 bits)

MAND_NOVAD / A4XF23 D-mannonate dehydratase; ManD; RspA homolog; EC 4.2.1.8 from Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) (see 2 papers)
2qjjA / A4XF23 Crystal structure of d-mannonate dehydratase from novosphingobium aromaticivorans (see paper)
    21% identity, 90% coverage of query (45.1 bits)

2qjmA Crystal structure of the k271e mutant of mannonate dehydratase from novosphingobium aromaticivorans complexed with mg and d-mannonate
    22% identity, 90% coverage of query (44.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory