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Searching for up to 100 curated homologs for PP_3602 FitnessBrowser__Putida:PP_3602 (526 a.a.)

Found high-coverage hits (≥70%) to 80 curated proteins.

Removed hits that are identical to the query, leaving 79

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

kgsD / Q9I1Q0 2-ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    75% identity, 100% coverage of query (774 bits)

Pf6N2E2_612 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens FW300-N2E2
    76% identity, 99% coverage of query (753 bits)

PS417_11015 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae WCS417
    74% identity, 99% coverage of query (747 bits)

HSERO_RS00735 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Herbaspirillum seropedicae SmR1
    61% identity, 100% coverage of query (618 bits)

ACIAD0131 / Q6FFQ0 α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see paper)
KGSDH_ACIAD / Q6FFQ0 Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see paper)
Q6FFQ0 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Acinetobacter baylyi (see paper)
    57% identity, 99% coverage of query (575 bits)

lhpG / Q88NF5 α-ketoglutaric semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
    54% identity, 99% coverage of query (514 bits)

KGSD2_AZOBR / Q08IC0 Alpha-ketoglutaric semialdehyde dehydrogenase 2; alphaKGSA dehydrogenase 2; 2,5-dioxovalerate dehydrogenase 2; KGSADH-II; EC 1.2.1.26 from Azospirillum brasilense (see paper)
Q08IC0 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense (see paper)
    51% identity, 98% coverage of query (482 bits)

KGSD3_AZOBR / Q08IB7 Alpha-ketoglutaric semialdehyde dehydrogenase 3; alphaKGSA dehydrogenase 3; 2,5-dioxovalerate dehydrogenase 3; KGSADH-III; EC 1.2.1.26 from Azospirillum brasilense (see paper)
Q08IB7 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense (see paper)
    52% identity, 98% coverage of query (468 bits)

Ga0059261_1896 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sphingomonas koreensis DSMZ 15582
    51% identity, 99% coverage of query (462 bits)

aldH / AAA89078.1 fatty aldehyde dehydrogenase from Vibrio harveyi (see paper)
    44% identity, 94% coverage of query (400 bits)

1eyyA / Q56694 Crystal structure of the NADP+ dependent aldehyde dehydrogenase from vibrio harveyi. (see paper)
    44% identity, 94% coverage of query (400 bits)

Build an alignment

Build an alignment for PP_3602 and 11 homologs with ≥ 30% identity

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Change minimum %identity:

Additional hits (identity < 30%)

Ac3H11_612 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp. GW101-3H11
    29% identity, 83% coverage of query (110 bits)

padA / CAA66106.1 phenylacetaldehyde dehydrogenase from Escherichia coli (see paper)
    28% identity, 75% coverage of query (94.7 bits)

A0A0A7PB40 phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Sphingopyxis fribergensis (see paper)
    27% identity, 93% coverage of query (92.8 bits)

YdbG / b1385 phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
feaB / P80668 phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli (strain K12) (see 10 papers)
P80668 phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli (see 3 papers)
    28% identity, 75% coverage of query (92.8 bits)

3ty7B / Q99SD6 Crystal structure of aldehyde dehydrogenase family protein from staphylococcus aureus
    25% identity, 76% coverage of query (92.4 bits)

ALDH4_BACSU / O34660 Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis (strain 168) (see paper)
    26% identity, 88% coverage of query (91.3 bits)

ROCA2_BACSU / P94391 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis (strain 168) (see 3 papers)
    24% identity, 81% coverage of query (87.4 bits)

Q65NN2 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis (see paper)
    24% identity, 81% coverage of query (84.0 bits)

YLX7_SCHPO / Q9URW9 Putative aldehyde dehydrogenase-like protein C922.07c; EC 1.2.1.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    22% identity, 76% coverage of query (83.6 bits)

GABD_BACSU / P94428 Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis (strain 168) (see 3 papers)
P94428 succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis (see paper)
    25% identity, 74% coverage of query (82.0 bits)

BETB_PSEAE / Q9HTJ1 NAD/NADP-dependent betaine aldehyde dehydrogenase; BADH; EC 1.2.1.8 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 3 papers)
Q9HTJ1 betaine-aldehyde dehydrogenase (EC 1.2.1.8) from Pseudomonas aeruginosa (see 5 papers)
    25% identity, 73% coverage of query (81.6 bits)

4cazA / Q9HTJ1 Crystal structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa in complex with nadh
    25% identity, 73% coverage of query (81.6 bits)

2woxA Betaine aldehyde dehydrogenase from pseudomonas aeruginosa with NAD(p) h-catalytic thiol adduct.
    25% identity, 73% coverage of query (81.6 bits)

2wmeA Crystallographic structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa
    25% identity, 73% coverage of query (81.6 bits)

SO0619 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis MR-1
    27% identity, 81% coverage of query (81.3 bits)

GAPN_STREI / Q3C1A6 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Glyceraldehyde-3-phosphate dehydrogenase [NADP(+)]; GAPN; Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase; Triosephosphate dehydrogenase; EC 1.2.1.9 from Streptococcus equinus (Streptococcus bovis) (see paper)
Q3C1A6 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Streptococcus equinus (see paper)
    27% identity, 74% coverage of query (79.7 bits)

putA / Q88D80 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 11 papers)
    29% identity, 70% coverage of query (79.7 bits)

PfGW456L13_1974 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens GW456-L13
    28% identity, 85% coverage of query (79.0 bits)

GADH_PICTO / Q6L285 D-glyceraldehyde dehydrogenase (NADP(+)); GADH; Glyceraldehyde DH; EC 1.2.1.89 from Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828 / KAW 2/3) (see paper)
Q6L285 D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Picrophilus torridus (see paper)
    22% identity, 87% coverage of query (79.0 bits)

Q9K9B2 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans (see paper)
    25% identity, 76% coverage of query (79.0 bits)

AO353_12810 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens FW300-N2E3
    28% identity, 70% coverage of query (78.2 bits)

UGA2 / P38067 NAD(P)-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.16) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see paper)
    25% identity, 74% coverage of query (77.8 bits)

2d4eC / Q5SJP9 Crystal structure of the hpcc from thermus thermophilus hb8
    26% identity, 77% coverage of query (76.6 bits)

SSDH2_SCHPO / Q9UTM8 Putative succinate-semialdehyde dehydrogenase C139.05 [NADP(+)]; SSDH; EC 1.2.1.16 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    23% identity, 79% coverage of query (76.3 bits)

doeC / E1V7V8 aspartate-semialdehyde dehydrogenase (non-phosphorylating) from Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) (see paper)
DOEC_HALED / E1V7V8 Aspartate-semialdehyde dehydrogenase (Non-phosphorylating); EC 1.2.1.- from Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) (see paper)
    27% identity, 76% coverage of query (76.3 bits)

cnbD / Q38M39 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni CNB-1 (see paper)
    28% identity, 74% coverage of query (75.5 bits)

PS417_04200 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae WCS417
    25% identity, 86% coverage of query (75.5 bits)

A9YD19 retinal dehydrogenase (EC 1.2.1.36) from Danio rerio (see paper)
    25% identity, 80% coverage of query (75.5 bits)

tsaD / P94682 TsaD (EC 1.2.1.62) from Comamonas testosteroni (see paper)
TSAD1_COMTE / P94682 4-(hydroxymethyl)benzenesulfonate dehydrogenase TsaD1; Toluenesulfonate aldehyde dehydrogenase TsaD; EC 1.1.1.257 from Comamonas testosteroni (Pseudomonas testosteroni) (see 2 papers)
    27% identity, 93% coverage of query (75.1 bits)

geoB / H1ZV37 geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans (see 3 papers)
GEOB_CASD6 / H1ZV37 Geranial dehydrogenase; GaDH; Geraniol oxidation pathway protein B; Perillyl aldehyde dehydrogenase; EC 1.2.1.86 from Castellaniella defragrans (strain DSM 12143 / CCUG 39792 / 65Phen) (Alcaligenes defragrans) (see 2 papers)
    27% identity, 85% coverage of query (75.1 bits)

davD / Q9I6M5 glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
DAVD_PSEAE / Q9I6M5 Glutarate-semialdehyde dehydrogenase; EC 1.2.1.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    27% identity, 74% coverage of query (74.7 bits)

SM_b20891 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti 1021
    26% identity, 86% coverage of query (74.3 bits)

6wsbA / Q3JLL8 Crystal structure of a betaine aldehyde dehydrogenase from burkholderia pseudomallei bound to cofactor NAD (see paper)
    26% identity, 76% coverage of query (74.3 bits)

ALDH8A1 / Q9H2A2 aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens (see 2 papers)
AL8A1_HUMAN / Q9H2A2 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens (Human) (see 2 papers)
Q9H2A2 aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens (see 2 papers)
    24% identity, 80% coverage of query (72.8 bits)

peaE / B1N7H3 phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida (see paper)
B1N7H3 phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida (see paper)
    27% identity, 76% coverage of query (72.4 bits)

3jz4A / P25526 Crystal structure of e. Coli NADP dependent enzyme (see paper)
    27% identity, 71% coverage of query (72.4 bits)

GabD / b2661 succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
gabD / P25526 succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli (strain K12) (see 22 papers)
GABD_ECOLI / P25526 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli (strain K12) (see 4 papers)
P25526 succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli K-12 (see paper)
GB|AAC75708.1 succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli K12 (see 5 papers)
    27% identity, 71% coverage of query (72.4 bits)

hpaE / Q46979 subunit of 5-carboxymethyl-2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.60) from Escherichia coli (see 2 papers)
    26% identity, 76% coverage of query (72.0 bits)

5ek6A Thermostable aldehyde dehydrogenase from pyrobaculum sp. 1860 complexed with NADP and isobutyraldehyde
    24% identity, 80% coverage of query (71.2 bits)

4h73A Thermostable aldehyde dehydrogenase from pyrobaculum sp. Complexed with NADP+
    24% identity, 80% coverage of query (71.2 bits)

3rhhD / Q9KAQ0 Crystal structure of NADP-dependent glyceraldehyde-3-phosphate dehydrogenase from bacillus halodurans c-125 complexed with NADP
    26% identity, 71% coverage of query (70.9 bits)

G7VCG0 aldehyde dehydrogenase (NADP+) (EC 1.2.1.4) from Pyrobaculum ferrireducens (see paper)
    24% identity, 80% coverage of query (70.9 bits)

5ekcE / G7VCG0 Thermostable aldehyde dehydrogenase from pyrobaculum sp.1860 complexed with NADP+
    24% identity, 80% coverage of query (70.9 bits)

5gtlA NADPH complex structure of aldehyde dehydrogenase from bacillus cereus
    26% identity, 76% coverage of query (69.3 bits)

5gtkA NAD+ complex structure of aldehyde dehydrogenase from bacillus cereus
    26% identity, 76% coverage of query (69.3 bits)

7uyyA / Q9HWJ2 The crystal structure of the pseudomonas aeruginosa aldehyde dehydrogenase encoded by the pa4189 gene in complex with nadh (see paper)
    26% identity, 75% coverage of query (65.9 bits)

PatD / b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655 (see 12 papers)
patD / P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12) (see 12 papers)
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12) (see 6 papers)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (see paper)
    26% identity, 81% coverage of query (64.7 bits)

1wndA Escherichia coli ydcw gene product is a medium-chain aldehyde dehydrogenase as determined by kinetics and crystal structure
    26% identity, 81% coverage of query (64.3 bits)

1wnbB Escherichia coli ydcw gene product is a medium-chain aldehyde dehydrogenase (complexed with nadh and betaine aldehyde)
    26% identity, 81% coverage of query (64.3 bits)

1wnbA / P77674 Escherichia coli ydcw gene product is a medium-chain aldehyde dehydrogenase (complexed with nadh and betaine aldehyde) (see paper)
    26% identity, 81% coverage of query (64.3 bits)

AL1L1_RAT / P28037 Cytosolic 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH; FDH; Aldehyde dehydrogenase family 1 member L1; FBP-CI; EC 1.5.1.6 from Rattus norvegicus (Rat) (see 7 papers)
P28037 formyltetrahydrofolate dehydrogenase (EC 1.5.1.6) from Rattus norvegicus (see 3 papers)
    24% identity, 76% coverage of query (63.9 bits)

4go2A Crystal structure of thE C-terminal domain of 10'formyltetrahydrofolate dehydrogenase in complex with thio-NADP
    25% identity, 77% coverage of query (62.8 bits)

2o2rA Crystal structure of thE C-terminal domain of rat 10'formyltetrahydrofolate dehydrogenase in complex with NADPH
    25% identity, 77% coverage of query (62.8 bits)

7rluA / P28037 Structure of aldh1l1 (10-formyltetrahydrofolate dehydrogenase) in complex with NADP (see paper)
    25% identity, 76% coverage of query (62.4 bits)

4itbA / B1XMM6 Structure of bacterial enzyme in complex with cofactor and substrate (see paper)
    24% identity, 73% coverage of query (62.0 bits)

VDH_CORGL / Q8NMB0 Vanillin dehydrogenase; Aromatic aldehyde dehydrogenase; EC 1.2.1.67; EC 1.2.1.64; EC 1.2.1.96 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) (see paper)
Q8NMB0 vanillin dehydrogenase (EC 1.2.1.67) from Corynebacterium glutamicum (see paper)
    24% identity, 75% coverage of query (60.8 bits)

5ur2B / Q6MNK1 Crystal structure of proline utilization a (puta) from bdellovibrio bacteriovorus inactivated by n-propargylglycine (see paper)
    24% identity, 92% coverage of query (60.8 bits)

5kf0A / A4JLJ7 Crystal structure of an aldedhyde dehydrogenase from burkholderia vietnamiensis
    25% identity, 79% coverage of query (58.5 bits)

3vz3A Structural insights into substrate and cofactor selection by sp2771
    24% identity, 73% coverage of query (57.8 bits)

YiaX / b3588 aldehyde dehydrogenase B (EC 1.2.1.4) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
aldB / P37685 aldehyde dehydrogenase B (EC 1.2.1.4) from Escherichia coli (strain K12) (see 7 papers)
ALDB_ECOLI / P37685 Aldehyde dehydrogenase B; Acetaldehyde dehydrogenase; EC 1.2.1.4 from Escherichia coli (strain K12) (see 2 papers)
aldB / GB|AAC76612.2 aldehyde dehydrogenase B; EC 1.2.1.- from Escherichia coli K12 (see 5 papers)
aldB / AAC36939.1 aldehyde dehydrogenase B from Escherichia coli (see paper)
    23% identity, 74% coverage of query (55.5 bits)

5j6bA / Q2T801 Crystal structure of aldehyde dehydrogenase from burkholderia thailandensis in covelent complex with NADPH
    24% identity, 78% coverage of query (48.9 bits)

1uxuA Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (gapn) from thermoproteus tenax
    24% identity, 71% coverage of query (46.6 bits)

1uxtA Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (gapn) from thermoproteus tenax
    24% identity, 71% coverage of query (46.6 bits)

1uxrA Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (gapn) from thermoproteus tenax
    24% identity, 71% coverage of query (46.6 bits)

1uxqA Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (gapn) from thermoproteus tenax
    24% identity, 71% coverage of query (46.6 bits)

1uxnA Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (gapn) from thermoproteus tenax
    24% identity, 71% coverage of query (46.6 bits)

GAPN_THETE / O57693 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase; Glyceraldehyde phosphate dehydrogenase (NAD(P)); GAPN; EC 1.2.1.90 from Thermoproteus tenax (see 4 papers)
O57693 glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (EC 1.2.1.90) from Thermoproteus tenax (see 4 papers)
    24% identity, 71% coverage of query (46.2 bits)

1ky8A / O57693 Crystal structure of the non-phosphorylating glyceraldehyde-3- phosphate dehydrogenase (see paper)
    24% identity, 71% coverage of query (46.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory