Searching for up to 100 curated homologs for PP_3786 FitnessBrowser__Putida:PP_3786 (402 a.a.)
Found high-coverage hits (≥70%) to 62 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
dapL / Q58786 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
DAPAT_METJA / Q58786 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
35% identity, 85% coverage of query (197 bits)
DAPAT_METMP / Q6LX26 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanococcus maripaludis (strain S2 / LL) (see paper)
34% identity, 76% coverage of query (187 bits)
Q8TQ40 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans (see paper)
32% identity, 84% coverage of query (178 bits)
Build an alignment for PP_3786 and 3 homologs with ≥ 30% identity
Or download the sequences
O66630 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus (see paper)
28% identity, 83% coverage of query (165 bits)
DAPAT_SYNFM / A0LEA5 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) (see paper)
A0LEA5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans (see paper)
29% identity, 91% coverage of query (162 bits)
Q3MDN5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis (see paper)
29% identity, 89% coverage of query (151 bits)
6l1nA Substrate bound bacf structure from bacillus subtillis
29% identity, 87% coverage of query (145 bits)
6l1lB / P39643 Apo-bacf structure from bacillus subtillis (see paper)
28% identity, 87% coverage of query (144 bits)
bacF / P39643 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis (strain 168) (see 2 papers)
BACF_BACSU / P39643 Transaminase BacF; Transaminase A; EC 2.6.1.- from Bacillus subtilis (strain 168) (see 3 papers)
28% identity, 87% coverage of query (144 bits)
6l1oB Product bound bacf structure from bacillus subtillis
28% identity, 87% coverage of query (144 bits)
DAPAT_GLOVI / Q7NDX4 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) (see paper)
Q7NDX4 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus (see paper)
29% identity, 89% coverage of query (140 bits)
DAPAT_MOOTA / Q2RK33 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica (strain ATCC 39073 / JCM 9320) (see paper)
Q2RK33 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica (see paper)
28% identity, 90% coverage of query (139 bits)
Q8YTF2 aspartate transaminase (EC 2.6.1.1) from Nostoc sp. (see paper)
32% identity, 73% coverage of query (137 bits)
2x5dD / Q9HV83 Crystal structure of a probable aminotransferase from pseudomonas aeruginosa (see paper)
25% identity, 89% coverage of query (132 bits)
YfdZ / b2379 glutamate—pyruvate aminotransferase AlaC (EC 2.6.1.2) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
alaC / P77434 glutamate—pyruvate aminotransferase AlaC (EC 2.6.1.2) from Escherichia coli (strain K12) (see 4 papers)
ALAC_ECOLI / P77434 Glutamate-pyruvate aminotransferase AlaC; EC 2.6.1.2 from Escherichia coli (strain K12) (see 3 papers)
25% identity, 89% coverage of query (128 bits)
D2Z0I0 alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus (see paper)
26% identity, 90% coverage of query (127 bits)
aspB-2 / P14909 aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (see paper)
P14909 aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus (see 5 papers)
25% identity, 86% coverage of query (122 bits)
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
25% identity, 86% coverage of query (122 bits)
Q8YUK5 aspartate transaminase (EC 2.6.1.1) from Nostoc sp. (see paper)
25% identity, 84% coverage of query (121 bits)
1gd9A / O59096 Crystall structure of pyrococcus protein-a1 (see paper)
25% identity, 78% coverage of query (120 bits)
O59096 aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii (see paper)
25% identity, 78% coverage of query (120 bits)
1gdeA Crystal structure of pyrococcus protein a-1 e-form
25% identity, 78% coverage of query (120 bits)
mtnE / O31665 L-glutamine:4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117; EC 2.6.1.88) from Bacillus subtilis (strain 168) (see 3 papers)
MTNE_BACSU / O31665 L-glutamine--4-(methylsulfanyl)-2-oxobutanoate aminotransferase; GTK; Glutamine transaminase MtnE; EC 2.6.1.117 from Bacillus subtilis (strain 168) (see 3 papers)
O31665 L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Bacillus subtilis (see 2 papers)
26% identity, 75% coverage of query (118 bits)
101251438 / A0A3Q7IS73 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum (see paper)
25% identity, 75% coverage of query (113 bits)
AAT_MUSP7 / C6C2Z3 Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Musicola paradisiaca (strain Ech703) (Dickeya paradisiaca) (Dickeya dadantii) (see paper)
25% identity, 76% coverage of query (110 bits)
OsIDI4 / FAA00314.1 aminotransferase from Oryza sativa Japonica Group (see paper)
27% identity, 75% coverage of query (106 bits)
2o1bA / Q2FV61 Structure of aminotransferase from staphylococcus aureus
27% identity, 84% coverage of query (106 bits)
ARAT2_THELN / H3ZPU1 Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) (see paper)
22% identity, 78% coverage of query (105 bits)
A0A1D6I5Q5 L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Zea mays (see paper)
26% identity, 75% coverage of query (104 bits)
B1B6U5 kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Haemaphysalis longicornis (see paper)
GI|170172430 kynurenine aminotransferase; EC 2.6.1.7 from Haemaphysalis longicornis (see paper)
24% identity, 76% coverage of query (102 bits)
aruH / Q9HUI9 L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
ARUH_PSEAE / Q9HUI9 Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
Q9HUI9 arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa (see paper)
27% identity, 75% coverage of query (101 bits)
A0A6F8T0V6 aspartate transaminase (EC 2.6.1.1) from Geobacillus sp. MAS1 (see paper)
28% identity, 75% coverage of query (99.0 bits)
AAPAT_CHLTE / Q8KDS8 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) (Chlorobium tepidum) (see paper)
27% identity, 73% coverage of query (97.8 bits)
aspC / GB|CAA63799.1 aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus (see paper)
28% identity, 75% coverage of query (97.1 bits)
KAT1_RAT / Q08415 Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus (Rat) (see 4 papers)
Q08415 kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Rattus norvegicus (see 5 papers)
25% identity, 72% coverage of query (95.1 bits)
aspB / GB|CAB14153.1 aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis (see paper)
aspB / AAB38454.1 aspartate aminotransferase from Bacillus subtilis (see paper)
25% identity, 71% coverage of query (94.4 bits)
3e2yA / Q71RI9 Crystal structure of mouse kynurenine aminotransferase iii in complex with glutamine (see paper)
24% identity, 75% coverage of query (89.4 bits)
5verA Mouse kynurenine aminotransferase iii, re-refinement of the PDB structure 3e2z
24% identity, 75% coverage of query (89.4 bits)
5vepA Mouse kynurenine aminotransferase iii, re-refinement of the PDB structure 3e2f
24% identity, 75% coverage of query (89.4 bits)
3e2zA Crystal structure of mouse kynurenine aminotransferase iii in complex with kynurenine
24% identity, 75% coverage of query (89.4 bits)
KAT3_MOUSE / Q71RI9 Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus (Mouse) (see 2 papers)
Q71RI9 glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus (see 5 papers)
24% identity, 75% coverage of query (89.0 bits)
patA / P16524 N-acetyl-L,L-diaminopimelate aminotransferase from Bacillus subtilis (strain 168) (see 3 papers)
DAPX_BACSU / P16524 Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis (strain 168) (see paper)
26% identity, 82% coverage of query (88.2 bits)
AAT_SYNY3 / Q55128 Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp. (strain PCC 6803 / Kazusa) (see 2 papers)
25% identity, 90% coverage of query (86.3 bits)
A0A6P3CW87 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Verrucomicrobium spinosum (see 2 papers)
25% identity, 79% coverage of query (85.9 bits)
8wkjA / A0A130QXX8 The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
23% identity, 74% coverage of query (85.5 bits)
4wljA High resolution crystal structure of human kynurenine aminotransferase-i in complex with aminooxyacetate
23% identity, 72% coverage of query (84.0 bits)
1w7nA Crystal structure of human kynurenine aminotransferase i in pmp form
23% identity, 72% coverage of query (83.6 bits)
1w7mA Crystal structure of human kynurenine aminotransferase i in complex with l-phe
23% identity, 72% coverage of query (83.6 bits)
1w7lA Crystal structure of human kynurenine aminotransferase i
23% identity, 72% coverage of query (83.6 bits)
2o0rA / P9WPZ5 The three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis (see paper)
26% identity, 75% coverage of query (82.8 bits)
CCBL1 / Q16773 kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens (see 6 papers)
KAT1_HUMAN / Q16773 Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens (Human) (see 4 papers)
Q16773 kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Homo sapiens (see 8 papers)
23% identity, 72% coverage of query (81.3 bits)
3fvuA Crystal structure of human kynurenine aminotransferase i in complex with indole-3-acetic acid
23% identity, 72% coverage of query (81.3 bits)
3fvsB / Q16773 Human kynurenine aminotransferase i in complex with glycerol (see paper)
23% identity, 72% coverage of query (81.3 bits)
3eleA / D0VX02 Crystal structure of amino transferase (rer070207001803) from eubacterium rectale at 2.10 a resolution
21% identity, 78% coverage of query (71.6 bits)
3ei5A Crystal structure of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with plp-glu: an external aldimine mimic
21% identity, 73% coverage of query (65.1 bits)
2z1zA Crystal structure of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with l-malate ion
21% identity, 73% coverage of query (65.1 bits)
3ei6A Crystal structure of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with plp-dap: an external aldimine mimic
21% identity, 73% coverage of query (64.7 bits)
DAP / Q93ZN9 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana (see paper)
DAPAT_ARATH / Q93ZN9 LL-diaminopimelate aminotransferase, chloroplastic; AtDAP-AT; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; Protein ABERRANT GROWTH AND DEATH 2; EC 2.6.1.83 from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
Q93ZN9 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana (see 4 papers)
21% identity, 73% coverage of query (64.7 bits)
3ei8A Crystal structure of k270n variant of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with ll-dap: external aldimine form
21% identity, 73% coverage of query (62.8 bits)
3ei9A / Q93ZN9 Crystal structure of k270n variant of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with l-glu: external aldimine form (see paper)
21% identity, 73% coverage of query (62.8 bits)
5z0qC / B2VJB8 Crystal structure of ovob (see paper)
24% identity, 81% coverage of query (55.8 bits)
1vp4A / Q9X0L5 Crystal structure of a putative aminotransferase (tm1131) from thermotoga maritima msb8 at 1.82 a resolution
21% identity, 75% coverage of query (55.1 bits)
Or start over
Lawrence Berkeley National Laboratory