Searching for up to 100 curated homologs for PP_4431 FitnessBrowser__Putida:PP_4431 (330 a.a.)
Found high-coverage hits (≥70%) to 41 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
1omoA / O28608 Alanine dehydrogenase dimer w/bound NAD (archaeal) (see paper)
33% identity, 98% coverage of query (159 bits)
ALADH_ARCFU / O28608 Alanine dehydrogenase; AlaDH; EC 1.4.1.1 from Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) (see 2 papers)
O28608 alanine dehydrogenase (EC 1.4.1.1) from Archaeoglobus fulgidus (see paper)
33% identity, 98% coverage of query (159 bits)
6t3eB / H3ZMH3 Structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline (see paper)
30% identity, 98% coverage of query (155 bits)
PY2CR_BACCZ / Q63FA5 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus cereus (strain ZK / E33L) (see paper)
33% identity, 79% coverage of query (136 bits)
PY2CR_BACC1 / Q73CR9 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus cereus (strain ATCC 10987 / NRS 248) (see paper)
33% identity, 79% coverage of query (133 bits)
PY2CR_BACHK / Q6HMS8 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus thuringiensis subsp. konkukian (strain 97-27) (see paper)
32% identity, 79% coverage of query (133 bits)
PY2CR_BACCR / Q81HB0 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) (see paper)
32% identity, 79% coverage of query (131 bits)
BHCD_PARDP / A1B8Z0 Iminosuccinate reductase; EC 1.4.1.- from Paracoccus denitrificans (strain Pd 1222) (see paper)
32% identity, 94% coverage of query (131 bits)
6rqaA / A1B8Z0 Crystal structure of the iminosuccinate reductase of paracoccus denitrificans in complex with NAD+ (see paper)
32% identity, 94% coverage of query (131 bits)
6rqaB Crystal structure of the iminosuccinate reductase of paracoccus denitrificans in complex with NAD+
32% identity, 94% coverage of query (131 bits)
CRYM / Q14894 ketimine reductase monomer (EC 1.5.1.1; EC 1.5.1.25) from Homo sapiens (see 9 papers)
CRYM_HUMAN / Q14894 Ketimine reductase mu-crystallin; NADP-regulated thyroid-hormone-binding protein; EC 1.5.1.25 from Homo sapiens (Human) (see 3 papers)
Q14894 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21); thiomorpholine-carboxylate dehydrogenase (EC 1.5.1.25) from Homo sapiens (see 2 papers)
30% identity, 97% coverage of query (112 bits)
2i99A / Q14894 Crystal structure of human mu_crystallin at 2.6 angstrom (see paper)
30% identity, 94% coverage of query (110 bits)
Build an alignment for PP_4431 and 12 homologs with ≥ 30% identity
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F1RPC8 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Sus scrofa (see paper)
29% identity, 89% coverage of query (105 bits)
Q9QYU4 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Rattus norvegicus (see paper)
28% identity, 97% coverage of query (103 bits)
W5PYW4 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Ovis aries (see paper)
29% identity, 96% coverage of query (103 bits)
O54983 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Mus musculus (see paper)
28% identity, 97% coverage of query (102 bits)
4bv9A Crystal structure of the NADPH form of mouse mu-crystallin.
28% identity, 94% coverage of query (97.4 bits)
SARD4_ARATH / Q9FLY0 Protein SAR DEFICIENT 4; Ornithine cyclodeaminase-like protein; AtOCD from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
28% identity, 77% coverage of query (95.5 bits)
B1GT63 Strombine dehydrogenase (EC 1.5.1.22) from Suberites domuncula (see paper)
29% identity, 78% coverage of query (95.1 bits)
4bvaA Crystal structure of the NADPH-t3 form of mouse mu-crystallin.
28% identity, 94% coverage of query (93.2 bits)
arcB / J7SH14 ornithine cyclodeaminase subunit (EC 4.3.1.12) from Clostridium sporogenes (strain ATCC 15579) (see 2 papers)
29% identity, 78% coverage of query (87.8 bits)
YK01_SCHPO / Q9HDZ0 Uncharacterized protein P11E10.01 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
29% identity, 88% coverage of query (87.4 bits)
5gzlA / D9UBW0 Cyclodeaminase_pa
34% identity, 71% coverage of query (82.0 bits)
5yu4A Structural basis for recognition of l-lysine, l-ornithine, and l-2,4- diamino butyric acid by lysine cyclodeaminase
34% identity, 71% coverage of query (82.0 bits)
5yu3A Structural basis for recognition of l-lysine, l-ornithine, and l-2,4- diamino butyric acid by lysine cyclodeaminase
34% identity, 71% coverage of query (82.0 bits)
5gziA Cyclodeaminase_pa
34% identity, 71% coverage of query (82.0 bits)
fkbL / Q9KIE2 L-lysine cyclodeaminase (EC 4.3.1.28) from Streptomyces hygroscopicus subsp. ascomyceticus (see paper)
32% identity, 73% coverage of query (80.1 bits)
4mp6A / A0A0H3K9Y6 Staphyloferrin b precursor biosynthetic enzyme sbnb bound to citrate and NAD+ (see paper)
25% identity, 99% coverage of query (79.0 bits)
sbnB / Q2G1N2 N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase monomer (EC 1.5.1.51) from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see 2 papers)
SBNB_STAA8 / Q2G1N2 N-((2S)-2-amino-2-carboxyethyl)-L-glutamate dehydrogenase; Staphyloferrin B biosynthesis protein SbnB; EC 1.5.1.51 from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see 3 papers)
A0A0H3K9Y6 N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase (EC 1.5.1.51) from Staphylococcus aureus (see 2 papers)
25% identity, 99% coverage of query (79.0 bits)
OCD_PSEPK / Q88H32 Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
Q88H32 ornithine cyclodeaminase (EC 4.3.1.12) from Pseudomonas putida (see 2 papers)
28% identity, 79% coverage of query (75.9 bits)
1x7dA Crystal structure analysis of ornithine cyclodeaminase complexed with NAD and ornithine to 1.6 angstroms
28% identity, 79% coverage of query (75.9 bits)
1u7hA / Q88H32 Structure and a proposed mechanism for ornithine cyclodeaminase from pseudomonas putida (see paper)
28% identity, 79% coverage of query (75.5 bits)
NFED_RHIML / P33728 Nodulation efficiency protein NfeD; EC 1.-.-.- from Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
26% identity, 84% coverage of query (72.4 bits)
tubZ / CAF05645.1 TubZ protein from Archangium disciforme (see paper)
30% identity, 75% coverage of query (70.5 bits)
dauB / Q9HXE4 anabolic L-arginine dehydrogenase (EC 1.4.1.25) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
DAUB_PSEAE / Q9HXE4 NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB; EC 1.4.1.25 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
Q9HXE4 L-arginine dehydrogenase (EC 1.4.1.25) from Pseudomonas aeruginosa (see paper)
28% identity, 89% coverage of query (64.7 bits)
7cxuB / A6YEI2 Crystal structure of cmnk in complex with NAD+ (see paper)
25% identity, 72% coverage of query (60.5 bits)
tynB / D7F5L7 tyramine oxidase subunit B (EC 1.4.3.4) from Pseudomonas putida (see paper)
25% identity, 75% coverage of query (56.6 bits)
rapL / Q54304 L-lysine cyclodeaminase (EC 4.3.1.28) from Streptomyces rapamycinicus (strain ATCC 29253 / DSM 41530 / NRRL 5491 / AYB-994) (see paper)
RAPL_STRRN / Q54304 L-lysine cyclodeaminase; Rapamycin biosynthesis protein L; EC 4.3.1.28 from Streptomyces rapamycinicus (strain ATCC 29253 / DSM 41530 / NRRL 5491 / AYB-994) (Streptomyces hygroscopicus (strain ATCC 29253)) (see 2 papers)
26% identity, 87% coverage of query (53.9 bits)
8j1gB / A0A7Y0ZV07 Structure of amino acid dehydrogenase in complex with NADPH (see paper)
27% identity, 93% coverage of query (50.8 bits)
8j1cB Structure of amino acid dehydrogenase in complex with NADP
28% identity, 78% coverage of query (48.1 bits)
8j1cA Structure of amino acid dehydrogenase in complex with NADP
27% identity, 78% coverage of query (47.0 bits)
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Lawrence Berkeley National Laboratory