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Searching for up to 100 curated homologs for PP_4678 FitnessBrowser__Putida:PP_4678 (338 a.a.)

Found high-coverage hits (≥70%) to 74 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

ILVC_PSEAE / Q9HVA2 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    93% identity, 100% coverage of query (653 bits)

ILVC_AZOVD / C1DFH7 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Azotobacter vinelandii (strain DJ / ATCC BAA-1303) (see paper)
C1DFH7 ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Azotobacter vinelandii (see paper)
    90% identity, 100% coverage of query (641 bits)

4xiyA / C1DFH7 Crystal structure of ketol-acid reductoisomerase from azotobacter (see paper)
    90% identity, 97% coverage of query (621 bits)

ilvC / Q0KCU2 acetohydroxyacid isomeroreductase (EC 1.1.1.86) from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
    70% identity, 100% coverage of query (500 bits)

8upqB / Q9PHN5 Campylobacter jejuni ketol-acid reductoisomerase in complex with 2,3- dihydroxy-3-isovalerate.
    64% identity, 100% coverage of query (457 bits)

7rduA Crystal structure of campylobacter jejuni keto said reductoisomerase in complex with magnesium and oxidixized and reduced NADPH
    64% identity, 97% coverage of query (446 bits)

8uppA Campylobacter jejuni ketol-acid reductoisomerase in complex with NADPH and hoe704
    64% identity, 97% coverage of query (444 bits)

8sxdA Campylobacter jejuni keto-acid reductoisomerase in complex with intermediate and NADP+
    64% identity, 97% coverage of query (444 bits)

8swmA Crystal structure of campylobacter jejuni ketol-acid reductoisomerase in complex with 2-acetolactate
    64% identity, 96% coverage of query (441 bits)

D3PT81 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Meiothermus ruber (see paper)
    61% identity, 98% coverage of query (423 bits)

8cy8A Apo form cryo-em structure of campylobacter jejune ketol-acid reductoisommerase crosslinked by glutaraldehyde
    62% identity, 97% coverage of query (417 bits)

ILVC_SLAES / D0WGK0 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Slackia exigua (strain ATCC 700122 / DSM 15923 / CIP 105133 / JCM 11022 / KCTC 5966 / S-7) (see paper)
D0WGK0 ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383) from Slackia exigua (see paper)
    60% identity, 96% coverage of query (415 bits)

4kqwA The structure of the slackia exigua kari in complex with NADP
    60% identity, 96% coverage of query (414 bits)

4kqxB / D0WGK0 Mutant slackia exigua kari ddv in complex with NAD and an inhibitor (see paper)
    58% identity, 98% coverage of query (412 bits)

ILVC_SYNWW / Q0AV19 Ketol-acid reductoisomerase (NAD(P)(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.383 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see paper)
    57% identity, 98% coverage of query (394 bits)

4tskA / C8WR67 Ketol-acid reductoisomerase from alicyclobacillus acidocaldarius (see paper)
    58% identity, 98% coverage of query (392 bits)

ILVC_THEPS / K4LVZ1 Ketol-acid reductoisomerase (NAD(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.382 from Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 26808 / PB) (see paper)
    55% identity, 98% coverage of query (392 bits)

ILVC_ALIAD / C8WR67 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / BCRC 14685 / JCM 5260 / KCTC 1825 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-IA) (Bacillus acidocaldarius) (see paper)
C8WR67 ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Alicyclobacillus acidocaldarius subsp. acidocaldarius (see 2 papers)
    58% identity, 98% coverage of query (392 bits)

ilvC / AAB38428.1 acetohydroxy acid isomeroreductase from Mycobacterium avium (see paper)
    55% identity, 96% coverage of query (387 bits)

ILVC_MYCTU / P9WKJ7 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
A5U713 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis (see paper)
P9WKJ7 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis (see 6 papers)
    54% identity, 97% coverage of query (384 bits)

4ypoA / P9WKJ7 Crystal structure of mycobacterium tuberculosis ketol-acid reductoisomerase in complex with mg2+ (see paper)
    54% identity, 96% coverage of query (382 bits)

8ep7C / Q81S27 Crystal structure of the ketol-acid reductoisomerase from bacillus anthracis in complex with NADP
    57% identity, 97% coverage of query (379 bits)

8k32C / D7CJ24 The complex structure of slkari with nadh at 2.12-angstrom resolution
    53% identity, 96% coverage of query (378 bits)

ilvC / AAL99358.2 ketol-acid reductoisomerase from Geobacillus stearothermophilus (see paper)
    56% identity, 98% coverage of query (375 bits)

6bulB / Q2YUF3 Crystal structure of staphylococcus aureus ketol-acid reductoisomerase with hydroxyoxamate inhibitor 2
    56% identity, 96% coverage of query (375 bits)

Q2FWK4 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Staphylococcus aureus (see 3 papers)
    55% identity, 98% coverage of query (374 bits)

6vo2A Crystal structure of staphylococcus aureus ketol-acid reductoisomerase in complex with mg, NADPH and inhibitor.
    56% identity, 96% coverage of query (374 bits)

6c5nA Crystal structure of staphylococcus aureus ketol-acid reductoisomerase with hydroxyoxamate inhibitor 1
    56% identity, 96% coverage of query (374 bits)

6c55A Crystal structure of staphylococcus aureus ketol-acid reductosimerrase with hydroxyoxamate inhibitor 3
    56% identity, 96% coverage of query (374 bits)

6aqjA Crystal structures of staphylococcus aureus ketol-acid reductoisomerase in complex with two transition state analogs that have biocidal activity.
    56% identity, 96% coverage of query (374 bits)

5w3kA Crystal structure of staphylococcus aureus ketol-acid reductoisomerase in complex NADPH, mg2+ and cpd
    56% identity, 96% coverage of query (374 bits)

A0A0K2AZ61 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces ambofaciens (see paper)
    56% identity, 96% coverage of query (371 bits)

D6EC76 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans (see paper)
    57% identity, 97% coverage of query (367 bits)

D6ERQ9 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans (see paper)
Q9Z565 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor (see paper)
    56% identity, 96% coverage of query (366 bits)

Q9FBT8 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor (see paper)
    57% identity, 96% coverage of query (365 bits)

Q59818 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces avermitilis (see paper)
    55% identity, 97% coverage of query (363 bits)

Q57179 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Corynebacterium glutamicum (see paper)
    53% identity, 98% coverage of query (362 bits)

6jx2B / Q57179 Crystal structure of ketol-acid reductoisomerase from corynebacterium glutamicum (see paper)
    54% identity, 97% coverage of query (361 bits)

ILVC_HYDS0 / B4U6I9 Ketol-acid reductoisomerase (NAD(P)(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.383 from Hydrogenobaculum sp. (strain Y04AAS1) (see paper)
    54% identity, 98% coverage of query (358 bits)

6jx2A Crystal structure of ketol-acid reductoisomerase from corynebacterium glutamicum
    54% identity, 96% coverage of query (355 bits)

7ke2A Crystal structure of staphylococcus aureus ketol-acid reductoisomerase in complex with mg2+ and nsc116565
    55% identity, 95% coverage of query (348 bits)

7q03A Ketol-acid reductoisomerase from methanothermococcus thermolithotrophicus in the close state with NADP and mg2+ (see paper)
    52% identity, 96% coverage of query (347 bits)

A6UW80 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Methanococcus aeolicus (see paper)
    51% identity, 96% coverage of query (344 bits)

6l2iA / Q04M32 Ilvc, a ketol-acid reductoisomerase, from streptococcus pneumoniae_wt
    54% identity, 95% coverage of query (342 bits)

6l2iB Ilvc, a ketol-acid reductoisomerase, from streptococcus pneumoniae_wt
    53% identity, 95% coverage of query (338 bits)

ILVC_LACLA / Q02138 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis) (see paper)
Q02138 ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383) from Lactococcus lactis subsp. lactis (see paper)
    52% identity, 97% coverage of query (337 bits)

ILVC_ARCFU / O28294 Ketol-acid reductoisomerase (NAD(P)(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.383 from Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) (see paper)
O28294 ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382) from Archaeoglobus fulgidus (see paper)
    52% identity, 97% coverage of query (335 bits)

4xdyA / Q64BR7 Structure of nadh-preferring ketol-acid reductoisomerase from an uncultured archean (see paper)
    46% identity, 96% coverage of query (322 bits)

ILVC_UNCAG / Q64BR7 Ketol-acid reductoisomerase (NAD(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.382 from Uncultured archaeon GZfos26G2 (see paper)
Q64BR7 ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from uncultured archaeon GZfos26G2 (see paper)
    46% identity, 96% coverage of query (322 bits)

5e4rA / E0SRA9 Crystal structure of domain-duplicated synthetic class ii ketol-acid reductoisomerase 2ia_kari-dd (see paper)
    47% identity, 96% coverage of query (313 bits)

ILVC_IGNAA / E0SRA9 Ketol-acid reductoisomerase (NAD(P)(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.383 from Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) (see 3 papers)
E0SRA9 ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Ignisphaera aggregans (see paper)
    47% identity, 96% coverage of query (313 bits)

4xdzA Holo structure of ketol-acid reductoisomerase from ignisphaera aggregans
    47% identity, 96% coverage of query (312 bits)

ilvC / O27491 acetohydroxy-acid isomeroreductase subunit (EC 1.1.1.383) from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (see 3 papers)
    47% identity, 96% coverage of query (293 bits)

ILVC_METS5 / A4YI15 Ketol-acid reductoisomerase (NAD(P)(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.383 from Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2) (see paper)
    48% identity, 89% coverage of query (288 bits)

Q4J8K9 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Sulfolobus acidocaldarius (see paper)
    46% identity, 96% coverage of query (278 bits)

5yeqB / Q4J8K9 The structure of sac-kari protein (see paper)
    46% identity, 96% coverage of query (278 bits)

7pciA / Q2T3G7 Burg (holo) in complex with hydroxypyruvate-enol (8): biosynthesis of cyclopropanol rings in bacterial toxins (see paper)
    32% identity, 95% coverage of query (169 bits)

7pctA Burg e232q mutant (holo) in complex with enol-oxalacetate (15): biosynthesis of cyclopropanol rings in bacterial toxins
    32% identity, 95% coverage of query (169 bits)

7pcoA Burg e232q mutant (holo) in complex with 2r,3r-2,3-dihydroxy-6-methyl- heptanoate (12): biosynthesis of cyclopropanol rings in bacterial toxins
    32% identity, 95% coverage of query (169 bits)

7pceA Burg (apo): biosynthesis of cyclopropanol rings in bacterial toxins
    32% identity, 95% coverage of query (169 bits)

7pcmA Burg (holo) in complex with (z)-2,3-dihydroxy-6-methyl-hept-2-enoate (13): biosynthesis of cyclopropanol rings in bacterial toxins
    32% identity, 95% coverage of query (169 bits)

7pclA Burg (holo) in complex with 2-hydroxy-2-(hydroxy(isopropyl)amino) acetate (11): biosynthesis of cyclopropanolrings in bacterial toxins
    32% identity, 95% coverage of query (169 bits)

7pcgA Burg (holo) in complex with cyclopropane-1,1-dicarboxylate (7): biosynthesis of cyclopropanol rings in bacterial toxins
    32% identity, 95% coverage of query (169 bits)

7pcnA Burg (holo) in complex with gonyenediol (14), trigonic acid (6) and dms: biosynthesis of cyclopropanol rings in bacterial toxins
    32% identity, 95% coverage of query (169 bits)

A0KS29 ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383) from Shewanella sp. (see paper)
    32% identity, 89% coverage of query (166 bits)

IlvC / b3774 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86; EC 1.1.1.169) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
ilvC / P05793 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86; EC 1.1.1.169) from Escherichia coli (strain K12) (see 40 papers)
ILVC_ECOLI / P05793 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 2; Ketol-acid reductoisomerase type II; EC 1.1.1.86 from Escherichia coli (strain K12) (see 9 papers)
P05793 ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Escherichia coli (see 3 papers)
ilvC ketol-acid reductoisomerase; EC 1.1.1.86 from Escherichia coli K12 (see 2 papers)
    35% identity, 91% coverage of query (165 bits)

3ulkA / P05793 E. Coli ketol-acid reductoisomerase in complex with NADPH and mg2+ (see paper)
    35% identity, 91% coverage of query (165 bits)

ILVC_SALTY / P05989 Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 2; Ketol-acid reductoisomerase type II; EC 1.1.1.86 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
    34% identity, 91% coverage of query (162 bits)

A6TGG1 ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Klebsiella pneumoniae subsp. pneumoniae (see paper)
    34% identity, 91% coverage of query (162 bits)

P78827 Probable ketol-acid reductoisomerase, mitochondrial; Acetohydroxy-acid reductoisomerase; Alpha-keto-beta-hydroxylacyl reductoisomerase; EC 1.1.1.86 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
    36% identity, 91% coverage of query (160 bits)

ILVC_DESOH / A8ZTR0 Ketol-acid reductoisomerase (NAD(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; EC 1.1.1.382 from Desulfosudis oleivorans (strain DSM 6200 / JCM 39069 / Hxd3) (Desulfococcus oleovorans) (see paper)
    32% identity, 85% coverage of query (139 bits)

6jczC / Q97YJ9 Cryo-em structure of sulfolobus solfataricus ketol-acid reductoisomerase (sso-kari) in complex with mg2+, NADPH, and cpd at ph7.5 (see paper)
    32% identity, 86% coverage of query (136 bits)

6jd1A Cryo-em structure of sulfolobus solfataricus ketol-acid reductoisomerase (sso-kari) in complex with mg2+, nadh, and cpd at ph7.5
    32% identity, 86% coverage of query (135 bits)

ILV5 mitochondrial ketol-acid reductoisomerase from Candida albicans (see paper)
    32% identity, 95% coverage of query (132 bits)

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Build an alignment for PP_4678 and 74 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory