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Searching for up to 100 curated homologs for Pf1N1B4_1189 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_1189 (223 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

HP15_4090 L-lactate dehydrogenase, LutC subunit from Marinobacter adhaerens HP15
    64% identity, 100% coverage of query (285 bits)

Q5F884 L-lactate dehydrogenase (subunit 2/3) (EC 1.1.1.27) from Neisseria gonorrhoeae (see paper)
    40% identity, 100% coverage of query (149 bits)

RR42_RS21290 L-lactate dehydrogenase, LutC subunit from Cupriavidus basilensis FW507-4G11
    38% identity, 99% coverage of query (144 bits)

Build an alignment

Build an alignment for Pf1N1B4_1189 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

lutC / O32259 component of an iron-sulfur oxidase for L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis (strain 168) (see paper)
LUTC_BACSU / O32259 Lactate utilization protein C from Bacillus subtilis (strain 168) (see paper)
    25% identity, 84% coverage of query (54.3 bits)

LUTC_BACCR / Q81GA3 Lactate utilization protein C from Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) (see paper)
    21% identity, 88% coverage of query (46.6 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory