Searching for up to 100 curated homologs for Pf1N1B4_1702 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_1702 (373 a.a.)
Found high-coverage hits (≥70%) to 17 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
METN_BACSU / O32169 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Bacillus subtilis (strain 168) (see paper)
TC 3.A.1.24.2 / O32169 MetN (C) (aka YusC), component of The L- and D-methionine porter (also transports methionine sulfoxide from Bacillus subtilis subsp. subtilis str. 168 (see 2 papers)
49% identity, 84% coverage of query (311 bits)
MetN / b0199 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
MetN / P30750 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli (strain K12) (see 3 papers)
METN_ECOLI / P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 7 papers)
P30750 ABC-type methionine transporter (subunit 2/2) (EC 7.4.2.11) from Escherichia coli (see 3 papers)
TC 3.A.1.24.1 / P30750 MetN, D-methionine transport ATP-binding protein, component of The L- and D-methionine porter (also transports formyl-L-methionine and other methionine derivatives) (Zhang et al., 2003). The 3.7A structure of MetNI has been solved. An allosteric regulatory mechanism operates at the level of transport activity, so increased intracellular levels of the transported ligand stabilize an inward-facing, ATPase-inactive state of MetNI to inhibit further ligand translocation into the cell from Escherichia coli (see 5 papers)
45% identity, 92% coverage of query (299 bits)
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form
45% identity, 92% coverage of query (298 bits)
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form
45% identity, 92% coverage of query (298 bits)
6cvlD / P30750 Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
45% identity, 92% coverage of query (297 bits)
TC 3.A.1.24.4 / Q8NSN2 Methionine import ATP-binding protein metN, component of L-Methionine uptake porter, MetQNI from Corynebacterium glutamicum (see paper)
44% identity, 93% coverage of query (286 bits)
TC 3.A.1.24.5 / Q9HT70 Methionine import ATP-binding protein MetN 2, component of L-Histidine uptake porter, MetIQN from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
47% identity, 91% coverage of query (285 bits)
TC 3.A.1.24.3 / Q8K8K8 AtmD (MetN), component of The methionine porter, AtmBDE from Streptococcus pyogenes serotype M3 (see 2 papers)
40% identity, 90% coverage of query (266 bits)
7aheC / Q9KIF7 Opua inhibited inward facing (see paper)
35% identity, 73% coverage of query (184 bits)
7ahhC Opua inhibited inward-facing, sbd docked
35% identity, 73% coverage of query (184 bits)
TC 3.A.1.12.5 / Q9RQ06 BusAA, component of Uptake system for glycine-betaine (high affinity) and proline (low affinity) (OpuAA-OpuABC) or BusAA-ABC of Lactococcus lactis). BusAA, the ATPase subunit, has a C-terminal tandem cystathionine β-synthase (CBS) domain which is the cytoplasmic K+ sensor for osmotic stress (osmotic strength)while the BusABC subunit has the membrane and receptor domains fused to each other (Biemans-Oldehinkel et al., 2006; Mahmood et al., 2006; Gul et al. 2012). An N-terminal amphipathic α-helix of OpuA is necessary for high activity but is not critical for biogenesis or the ionic regulation of transport from Lactococcus lactis (see paper)
34% identity, 73% coverage of query (183 bits)
8wooA Structure of the wild-type arabidopsis abcb19 in the brassinolide and amp-pnp bound state
30% identity, 71% coverage of query (106 bits)
8womA / Q9LJX0 Structure of the wild-type arabidopsis abcb19 in the brassinolide- bound state (see paper)
30% identity, 71% coverage of query (106 bits)
Build an alignment for Pf1N1B4_1702 and 13 homologs with ≥ 30% identity
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8wp0A Structure of the arabidopsis e529q/e1174q abcb19 in the atp bound state
29% identity, 71% coverage of query (104 bits)
7lkpA Structure of atp-free human abca4
24% identity, 77% coverage of query (75.9 bits)
ABCA1_HUMAN / O95477 Phospholipid-transporting ATPase ABCA1; ATP-binding cassette sub-family A member 1; ATP-binding cassette transporter 1; ABC-1; ATP-binding cassette 1; Cholesterol efflux regulatory protein; EC 7.6.2.1 from Homo sapiens (Human) (see 34 papers)
TC 3.A.1.211.14 / O95477 cAMP-dependent and sulfonylurea-sensitive anion transporter, ABCA1 of 2261 aas. Key gatekeeper influencing and possibly catalyzing intracellular phospholipid and cholesterol transport from Homo sapiens
24% identity, 71% coverage of query (75.1 bits)
YOR1_YEAST / P53049 Oligomycin resistance ATP-dependent permease YOR1; ABC transporter YOR1; ABC-type Cd(2+) transporter; ABC-type glutathione-S-conjugate transporter; Yeast oligomycin resistance protein 1; EC 7.2.2.2; EC 7.6.2.3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 9 papers)
TC 3.A.1.208.3 / P53049 Oligomycin-resistance protein YOR1 in plasma membrane (confers resistance to oligomycin, rhodamine B, tetracycline, verapamil, eosin Y and ethidium bromide; Grigoras et al., 2007)) from Saccharomyces cerevisiae (Baker's yeast) (see 10 papers)
YOR1 / RF|NP_011797.1 oligomycin resistance ATP-dependent permease YOR1 from Saccharomyces cerevisiae (see paper)
24% identity, 83% coverage of query (47.8 bits)
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Lawrence Berkeley National Laboratory