Searching for up to 100 curated homologs for Pf1N1B4_3233 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_3233 (259 a.a.)
Found high-coverage hits (≥70%) to 17 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
PfGW456L13_4591 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens GW456-L13
97% identity, 100% coverage of query (511 bits)
PS417_06705 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas simiae WCS417
97% identity, 100% coverage of query (507 bits)
AO353_17200 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens FW300-N2E3
95% identity, 100% coverage of query (502 bits)
CATJ_PSEKB / Q8VPF2 3-oxoadipate CoA-transferase subunit B; 3-oxoadipate:succinyl-CoA transferase subunit B; Beta-ketoadipate:succinyl-CoA transferase subunit B; EC 2.8.3.6 from Pseudomonas knackmussii (strain DSM 6978 / CCUG 54928 / LMG 23759 / B13) (see paper)
Q8VPF2 3-oxoadipate CoA-transferase (subunit 1/2) (EC 2.8.3.6) from Pseudomonas knackmussii (see 2 papers)
88% identity, 99% coverage of query (460 bits)
gctB / Q59112 GctB (EC 2.8.3.12) from Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4) (see paper)
Q59112 glutaconate CoA-transferase (subunit 1/2) (EC 2.8.3.12) from Acidaminococcus fermentans (see paper)
36% identity, 100% coverage of query (154 bits)
Build an alignment for Pf1N1B4_3233 and 5 homologs with ≥ 30% identity
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5mzyB / Q1D4I3 Crystal structure of the decarboxylase aiba/aibb in complex with a possible transition state analog (see paper)
27% identity, 95% coverage of query (76.3 bits)
5mzzB Crystal structure of the decarboxylase aiba/aibb in complex with 3- methylglutaconate
28% identity, 93% coverage of query (75.9 bits)
5mzxB Crystal structure of the decarboxylase aiba/aibb in complex with 4'- diphospho pantetheine
28% identity, 93% coverage of query (75.9 bits)
ipdB / P9WPV9 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA ligase β subunit from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 6 papers)
IPDB_MYCTU / P9WPV9 Cholesterol ring-cleaving hydrolase IpdB subunit; (3E)-2-(2-carboxylatoethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA hydrolase beta subunit; COCHEA-CoA hydrolase beta subunit; EC 4.1.99.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
26% identity, 95% coverage of query (71.2 bits)
6cojB / Q0S7Q0 Crystal structure of rhodococcus jostii rha1 ipdab e105a cochea-coa complex (see paper)
28% identity, 83% coverage of query (71.2 bits)
IPDB_RHOJR / Q0S7Q0 Cholesterol ring-cleaving hydrolase IpdB subunit; (3E)-2-(2-carboxylatoethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA hydrolase beta subunit; COCHEA-CoA hydrolase beta subunit; EC 4.1.99.- from Rhodococcus jostii (strain RHA1) (see 2 papers)
28% identity, 83% coverage of query (71.2 bits)
scoB / P56007 succinyl-CoA-transferase subunit B (EC 2.8.3.5) from Helicobacter pylori (strain ATCC 700392 / 26695) (see paper)
30% identity, 79% coverage of query (63.5 bits)
Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B from Pseudomonas fluorescens FW300-N2E2
27% identity, 86% coverage of query (61.6 bits)
Psest_1077 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) from Pseudomonas stutzeri RCH2
28% identity, 84% coverage of query (55.1 bits)
Sama_1356 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B from Shewanella amazonensis SB2B
25% identity, 82% coverage of query (48.9 bits)
pct / G0VND6 propanoyl-CoA transferase monomer (EC 2.8.3.1) from Megasphaera elsdenii DSM 20460 (see 3 papers)
A0A140JTF0 propionate CoA-transferase (EC 2.8.3.1) from Megasphaera elsdenii (see paper)
26% identity, 78% coverage of query (48.1 bits)
catJ / AAC46433.1 beta-ketoadipate succinyl-CoA transferase beta-subunit from Acinetobacter baylyi (see 8 papers)
28% identity, 74% coverage of query (45.1 bits)
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Lawrence Berkeley National Laboratory