Searching for up to 100 curated homologs for Pf1N1B4_3305 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_3305 (271 a.a.)

Found high-coverage hits (≥70%) to 10 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TauC / b0367 taurine ABC transporter membrane subunit (EC 7.6.2.7) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
TauC / Q47539 taurine ABC transporter membrane subunit (EC 7.6.2.7) from Escherichia coli (strain K12) (see 2 papers)
TAUC_ECOLI / Q47539 Taurine transport system permease protein TauC from Escherichia coli (strain K12) (see paper)
TC 3.A.1.17.1 / Q47539 TauC aka SSIC aka B0367, component of Taurine (2-aminoethane sulfonate) porter from Escherichia coli (see 4 papers)
    39% identity, 72% coverage of query (117 bits)

TC 3.A.1.17.2 / O85765 SsuC, component of Aromatic sulfonate porter from Pseudomonas putida (see paper)
    32% identity, 76% coverage of query (88.6 bits)

TC 3.A.1.16.2 / Q7BW13 Integral membrane protein, component of Bispecific cyanate/nitrite transporter (see paper)
    36% identity, 71% coverage of query (85.5 bits)

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Build an alignment for Pf1N1B4_3305 and 3 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

TC 3.A.1.17.4 / Q2BM70 Putative taurine uptake ABC transporter permease protein, component of The taurine uptake system, TauABC from Neptuniibacter caesariensis
    29% identity, 79% coverage of query (79.0 bits)

Ac3H11_2561 ABC transporter for L-Histidine, permease component 2 from Acidovorax sp. GW101-3H11
    31% identity, 73% coverage of query (78.2 bits)

SsuC / b0934 aliphatic sulfonate ABC transporter membrane subunit (EC 7.6.2.14) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
SsuC / P75851 aliphatic sulfonate ABC transporter membrane subunit (EC 7.6.2.14) from Escherichia coli (strain K12) (see 5 papers)
TC 3.A.1.17.10 / P75851 Putative aliphatic sulfonates transport permease protein SsuC, component of Aliphatic sulfonate (alkanesulfonate) import permease, SsuABC (YcbOEM) and is regluated by the transcriptional activator, Cbl from Escherichia coli (strain K12)
    33% identity, 77% coverage of query (75.1 bits)

OPUCB_LISM4 / G2JZ43 Carnitine transport permease protein OpuCB from Listeria monocytogenes serotype 1/2a (strain 10403S) (see 4 papers)
OPUCB_LISMN / Q9KHT8 Carnitine transport permease protein OpuCB from Listeria monocytogenes (see paper)
    27% identity, 74% coverage of query (52.0 bits)

TC 3.A.1.12.9 / Q8U4S4 OtaB, component of The salt-induced glycine betaine OtaABC transporter from Methanosarcina mazei (see paper)
    26% identity, 82% coverage of query (50.4 bits)

AO356_09615 ABC transporter for L-Histidine, permease component from Pseudomonas fluorescens FW300-N2C3
    26% identity, 72% coverage of query (47.0 bits)

OUSW_DICD3 / E0SCY2 Glycine betaine/choline transport system permease protein OusW from Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)) (see paper)
    26% identity, 72% coverage of query (46.2 bits)

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