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Searching for up to 100 curated homologs for Pf1N1B4_3710 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_3710 (330 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

cobC / P21633 threonine-phosphate decarboxylase (EC 4.1.1.81) from Sinorhizobium sp. (see paper)
    44% identity, 97% coverage of query (211 bits)

Build an alignment

Build an alignment for Pf1N1B4_3710 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Additional hits (identity < 30%)

cobD / P97084 L-threonine-O-3-phosphate decarboxylase subunit (EC 4.1.1.81) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
COBD_SALTY / P97084 Threonine-phosphate decarboxylase; L-threonine-O-3-phosphate decarboxylase; EC 4.1.1.81 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
P97084 threonine-phosphate decarboxylase (EC 4.1.1.81) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
    27% identity, 71% coverage of query (80.9 bits)

1lc7A / P97084 Crystal structure of l-threonine-o-3-phosphate decarboxylase from s. Enterica complexed with a substrate (see paper)
    26% identity, 71% coverage of query (79.3 bits)

1lkcA Crystal structure of l-threonine-o-3-phosphate decarboxylase from salmonella enterica
    26% identity, 71% coverage of query (79.0 bits)

1lc8A Crystal structure of l-threonine-o-3-phosphate decarboxylase from s. Enterica complexed with its reaction intermediate
    26% identity, 71% coverage of query (79.0 bits)

MmCobD / Q8PVB1 MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (see 2 papers)
Q8PVB1 threonine-phosphate decarboxylase (EC 4.1.1.81) from Methanosarcina mazei (see paper)
    27% identity, 72% coverage of query (76.6 bits)

PGA1_c25240 histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens BS107
    30% identity, 77% coverage of query (75.5 bits)

DvMF_0908 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris Miyazaki F
    31% identity, 78% coverage of query (64.7 bits)

DVU1029 histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris Hildenborough JW710
    29% identity, 78% coverage of query (63.9 bits)

orf2651 / A0A0D3RBW0 tryptophan—pyruvate aminotransferase (EC 2.6.1.99) from Streptomyces griseus (see 2 papers)
    27% identity, 74% coverage of query (63.2 bits)

Y1178_MYCTU / O50434 Probable aminotransferase Rv1178; EC 2.6.1.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    30% identity, 70% coverage of query (46.6 bits)

8bj3A / A0A072U7F9 Crystal structure of medicago truncatula histidinol-phosphate aminotransferase (hisn6) in complex with histidinol-phosphate (see paper)
    24% identity, 82% coverage of query (45.4 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory