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Searching for up to 100 curated homologs for Pf1N1B4_4276 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4276 (269 a.a.)

Found high-coverage hits (≥70%) to 9 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AO353_21345 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens FW300-N2E3
    91% identity, 100% coverage of query (514 bits)

Pf6N2E2_514 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens FW300-N2E2
    90% identity, 100% coverage of query (511 bits)

AO356_23170 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens FW300-N2C3
    89% identity, 100% coverage of query (509 bits)

PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas simiae WCS417
    86% identity, 100% coverage of query (473 bits)

BPHYT_RS13925 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Burkholderia phytofirmans PsJN
    60% identity, 99% coverage of query (327 bits)

SMc00432 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Sinorhizobium meliloti 1021
    54% identity, 99% coverage of query (292 bits)

iolB / P42413 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Bacillus subtilis (strain 168) (see 2 papers)
IOLB_BACSU / P42413 5-deoxy-glucuronate isomerase; 5DG isomerase; EC 5.3.1.30 from Bacillus subtilis (strain 168) (see paper)
P42413 5-deoxy-glucuronate isomerase (EC 5.3.1.30) from Bacillus subtilis (see paper)
    49% identity, 94% coverage of query (250 bits)

BWI76_RS03075 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Klebsiella michiganensis M5al
    48% identity, 99% coverage of query (246 bits)

Build an alignment

Build an alignment for Pf1N1B4_4276 and 8 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

PGA1_c07230 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Phaeobacter inhibens BS107
    25% identity, 90% coverage of query (71.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory