Searching for up to 100 curated homologs for Pf1N1B4_4325 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4325 (350 a.a.)

Found high-coverage hits (≥70%) to 21 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

A0A0H2Z8C6 agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa PA14 (see paper)
    77% identity, 97% coverage of query (516 bits)

3h7cX / Q8GWW7 Crystal structure of arabidopsis thaliana agmatine deiminase from cell free expression
    41% identity, 97% coverage of query (254 bits)

At5g08170 / Q8GWW7 agmatine iminohydrolase (EC 3.5.3.12) from Arabidopsis thaliana (see paper)
AGUA_ARATH / Q8GWW7 Agmatine deiminase; Agmatine iminohydrolase; Protein EMBRYO DEFECTIVE 1873; EC 3.5.3.12 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
    40% identity, 97% coverage of query (251 bits)

6nicD / G7JT50 Crystal structure of medicago truncatula agmatine iminohydrolase (deiminase) in complex with 6-aminohexanamide (see paper)
    41% identity, 96% coverage of query (241 bits)

AGUA_MEDTR / G7JT50 Agmatine deiminase; Agmatine iminohydrolase; MtAIH; EC 3.5.3.12 from Medicago truncatula (Barrel medic) (Medicago tribuloides) (see paper)
    41% identity, 96% coverage of query (241 bits)

AO356_10030 Agmatine deiminase (EC 3.5.3.12) from Pseudomonas fluorescens FW300-N2C3
    39% identity, 97% coverage of query (230 bits)

aguA / Q9I6J9 agmatine deiminase subunit (EC 3.5.3.12) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
AGUA_PSEAE / Q9I6J9 Agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
Q9I6J9 agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa (see 2 papers)
    41% identity, 97% coverage of query (223 bits)

Q5KR05 agmatine deiminase (EC 3.5.3.12) from Selenomonas ruminantium (see paper)
    35% identity, 97% coverage of query (218 bits)

AGUA_ENTFA / Q837U5 Putative agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Enterococcus faecalis (strain ATCC 700802 / V583) (see paper)
Q837U5 agmatine deiminase (EC 3.5.3.12) from Enterococcus faecalis (see 2 papers)
    35% identity, 97% coverage of query (217 bits)

S0F349 agmatine deiminase (EC 3.5.3.12) from Lactococcus cremoris (see paper)
    36% identity, 97% coverage of query (217 bits)

A0A0H3G8U9 agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes serotype 1/2a (see paper)
    35% identity, 97% coverage of query (216 bits)

A0A0H2Z743 agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa PA14 (see paper)
    35% identity, 95% coverage of query (194 bits)

Build an alignment

Build an alignment for Pf1N1B4_4325 and 12 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

aguA / O24890 agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori (strain ATCC 700392 / 26695) (see 6 papers)
    28% identity, 94% coverage of query (142 bits)

Q9ZN18 agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori (see paper)
    29% identity, 94% coverage of query (140 bits)

C8J_0892 / A0A5Y8XU16 agmatine deaminase (EC 3.5.3.12) from Campylobacter jejuni (see paper)
    26% identity, 94% coverage of query (132 bits)

Q0P9V0 agmatine deiminase (EC 3.5.3.12) from Campylobacter jejuni subsp. jejuni serotype O:2 (see paper)
    25% identity, 94% coverage of query (130 bits)

6b2wA / Q0P9V0 C. Jejuni c315s agmatine deiminase with substrate bound (see paper)
    25% identity, 94% coverage of query (127 bits)

6i0xB / Q9RQJ2 Porphyromonas gingivalis peptidylarginine deminase (ppad) mutant g231n/e232t/n235d in complex with cl-amidine. (see paper)
    21% identity, 89% coverage of query (58.5 bits)

4ytbA Crystal structure of porphyromonas gingivalis peptidylarginine deiminase (ppad) in complex with dipeptide asp-gln.
    21% identity, 89% coverage of query (56.6 bits)

4ytgA Crystal structure of porphyromonas gingivalis peptidylarginine deiminase (ppad) mutant c351a in complex with dipeptide met-arg.
    21% identity, 89% coverage of query (56.2 bits)

PAD_PORGI / Q9RQJ2 Peptidylarginine deiminase; EC 3.5.3.- from Porphyromonas gingivalis (strain ATCC BAA-308 / W83) (see paper)
Q9RQJ2 protein-arginine deiminase (EC 3.5.3.15) from Porphyromonas gingivalis (see 5 papers)
    21% identity, 89% coverage of query (55.8 bits)

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