Searching for up to 100 curated homologs for Pf1N1B4_4511 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4511 (270 a.a.)
Found high-coverage hits (≥70%) to 16 curated proteins.
Removed hits that are identical to the query, leaving 15
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
udh / Q888H1 uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see 2 papers)
URODH_PSESM / Q888H1 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see paper)
Q888H1 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (see 4 papers)
87% identity, 100% coverage of query (497 bits)
PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae WCS417
88% identity, 98% coverage of query (488 bits)
PP_1171 Uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440
URODH_PSEPK / Q88NN6 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
Q88NN6 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440 (see paper)
77% identity, 99% coverage of query (445 bits)
HSERO_RS23040 D-galacturonate dehydrogenase (EC 1.1.1.203) from Herbaspirillum seropedicae SmR1
69% identity, 99% coverage of query (388 bits)
udh / Q7CRQ0 D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum (strain C58 / ATCC 33970) (see 6 papers)
URODH_AGRFC / Q7CRQ0 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 4 papers)
Q7CRQ0 uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens (see 4 papers)
52% identity, 95% coverage of query (278 bits)
3rfvA / Q7CRQ0 Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens complexed with nadh and product (see paper)
52% identity, 95% coverage of query (278 bits)
3rfxA Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens, y136a mutant complexed with NAD
51% identity, 95% coverage of query (275 bits)
D6Y7Y8 uronate dehydrogenase (EC 1.1.1.203) from Thermobispora bispora (see paper)
46% identity, 94% coverage of query (208 bits)
azf / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase monomer (EC 1.1.1.388) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see paper)
G6PD_HALVD / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase; Glc6PDH; Archaeal zwischenferment; EC 1.1.1.388 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
D4GS48 glucose-6-phosphate dehydrogenase (NAD+) (EC 1.1.1.388) from Haloferax volcanii (see paper)
33% identity, 88% coverage of query (117 bits)
xacB / D4GP33 L-arabinose 1-dehydrogenase (NADP+) monomer (EC 1.1.1.376) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see 3 papers)
ARADH_HALVD / D4GP33 L-arabinose 1-dehydrogenase (NAD(P)(+)); L-AraDH; EC 1.1.1.376 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see 2 papers)
D4GP33 L-arabinose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.376); L-arabinose 1-dehydrogenase (EC 1.1.1.46) from Haloferax volcanii (see paper)
30% identity, 86% coverage of query (98.2 bits)
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RMLB_MYCS2 / A0QSK6 dTDP-glucose 4,6-dehydratase; EC 4.2.1.46 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
25% identity, 77% coverage of query (58.5 bits)
jadT / Q939Q5 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) from Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) (see paper)
29% identity, 84% coverage of query (56.6 bits)
desIV / Q9ZGH3 dTDP-glucose 4,6-dehydratase monomer (EC 4.2.1.46) from Streptomyces venezuelae (see paper)
28% identity, 78% coverage of query (54.7 bits)
uxe / Q92WA3 UDP-xylose 4-epimerase subunit (EC 5.1.3.5) from Rhizobium meliloti (strain 1021) (see paper)
Q92WA3 UDP-arabinose 4-epimerase (EC 5.1.3.5) from Sinorhizobium meliloti (see paper)
28% identity, 70% coverage of query (51.2 bits)
novT / Q9L9E8 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) from Streptomyces niveus (see 2 papers)
27% identity, 78% coverage of query (45.8 bits)
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Lawrence Berkeley National Laboratory