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Searching for up to 100 curated homologs for Pf1N1B4_4626 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4626 (405 a.a.)

Found high-coverage hits (≥70%) to 7 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_3314 D-galactono-lactonase (EC 3.1.1.-) from Pseudomonas fluorescens GW456-L13
    85% identity, 94% coverage of query (647 bits)

PLH9_FORAG / T2KMF9 6-phosphogluconolactonase; P9_lactonase; Polysaccharide utilization locus H protein P9; PUL H protein P9; EC 3.1.1.31 from Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) (see paper)
    34% identity, 86% coverage of query (189 bits)

6PGL_BACSU / O34499 6-phosphogluconolactonase; EC 3.1.1.31 from Bacillus subtilis (strain 168) (see paper)
    31% identity, 84% coverage of query (179 bits)

Build an alignment

Build an alignment for Pf1N1B4_4626 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

uxuF / Q881W7 D-galactaro-1,5-lactonase/D-glucaro-1,5-lactonase from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see paper)
    29% identity, 71% coverage of query (121 bits)

HSERO_RS15795 galactaro-1,5-lactonase from Herbaspirillum seropedicae SmR1
    30% identity, 86% coverage of query (120 bits)

Pgl / b0767 6-phosphogluconolactonase (EC 3.1.1.31) from Escherichia coli K-12 substr. MG1655 (see 8 papers)
pgl / P52697 6-phosphogluconolactonase (EC 3.1.1.31) from Escherichia coli (strain K12) (see 8 papers)
6PGL_ECOLI / P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
    27% identity, 82% coverage of query (97.8 bits)

6PGL_ARTBC / D4B0N9 Probable 6-phosphogluconolactonase ARB_02015; EC 3.1.1.31 from Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) (Trichophyton mentagrophytes) (see paper)
    27% identity, 91% coverage of query (89.0 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory