Searching for up to 100 curated homologs for Pf1N1B4_4963 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4963 (321 a.a.)

Found high-coverage hits (≥70%) to 13 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.80.1.4 / S5XTE7 Citrate uptake transporter, substrate binding protein, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
    35% identity, 90% coverage of query (184 bits)

Dshi_3123 Tricarboxylate transport protein TctC from Dinoroseobacter shibae DFL-12
    30% identity, 92% coverage of query (136 bits)

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Build an alignment for Pf1N1B4_4963 and 2 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

HP15_2661 Citrate uptake transporter, substrate-binding component TctC from Marinobacter adhaerens HP15
    29% identity, 91% coverage of query (122 bits)

TC 2.A.80.1.1 / Q9FA46 TctC aka STM2786, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
    32% identity, 79% coverage of query (118 bits)

2dvzA / Q7W0A0 Structure of a periplasmic transporter (see paper)
    27% identity, 87% coverage of query (76.6 bits)

tphCII / BAE47084.1 periplasmic terephthalate binding receptor from Comamonas sp. E6 (see paper)
    24% identity, 97% coverage of query (66.6 bits)

iphC / BAH70270.1 periplasmic isophthalate binding receptor from Comamonas sp. E6 (see 2 papers)
    24% identity, 84% coverage of query (65.1 bits)

7ndsA / A0A5N7XFM8 Crystal structure of tphc in a closed conformation (see paper)
    24% identity, 89% coverage of query (64.7 bits)

7ndrD Crystal structure of tphc in an open conformation
    24% identity, 89% coverage of query (64.7 bits)

TC 2.A.80.1.2 / Q5D0X7 Terephthalate permease, component of Terephthalate (TPA) aromatic acid uptake transport system, TpiBA/TphC from Comamonas testosteroni
    23% identity, 97% coverage of query (62.0 bits)

8hkbA / A0A0K8P8D2 Tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d (see paper)
    22% identity, 90% coverage of query (57.0 bits)

6hkeB / Q6N446 Matc (rpa3494) from rhodopseudomonas palustris with bound malate (see paper)
    26% identity, 87% coverage of query (52.0 bits)

2f5xB / Q7VTS1 Structure of periplasmic binding protein bugd (see paper)
    23% identity, 80% coverage of query (44.7 bits)

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