Searching for up to 100 curated homologs for Pf1N1B4_5075 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_5075 (212 a.a.)
Found high-coverage hits (≥70%) to 31 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
OTNC_CUPNH / Q0KBC9 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (Ralstonia eutropha) (see paper)
Q0KBC9 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Cupriavidus necator (see paper)
71% identity, 100% coverage of query (313 bits)
OTNC_PECAS / Q6CZ24 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica) (see paper)
Q6CZ24 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Pectobacterium atrosepticum (see paper)
44% identity, 89% coverage of query (177 bits)
6voqA / Q0QC76 Crystal structure of ygbl, a putative aldolase/epimerase/decarboxylase from klebsiella pneumoniae
46% identity, 95% coverage of query (176 bits)
OTNC_ECOL6 / A0A0H2VA12 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
A0A0H2VA12 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Escherichia coli (see paper)
45% identity, 91% coverage of query (175 bits)
YgbL / b2738 putative 3-oxo-tetronate 4-phosphate decarboxylase YgbL from Escherichia coli K-12 substr. MG1655 (see 2 papers)
44% identity, 91% coverage of query (172 bits)
otnC / Q57199 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see paper)
OTNC_HAEIN / Q57199 3-oxo-tetronate 4-phosphate decarboxylase; EC 4.1.1.104 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see paper)
Q57199 3-dehydro-4-phosphotetronate decarboxylase (EC 4.1.1.104) from Haemophilus influenzae (see paper)
46% identity, 86% coverage of query (167 bits)
MJ1418 / Q58813 fuculose-1-phosphate aldolase subunit (EC 4.1.2.17) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
FUCA_METJA / Q58813 L-fuculose phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
Q58813 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Methanocaldococcus jannaschii (see paper)
31% identity, 86% coverage of query (96.7 bits)
Build an alignment for Pf1N1B4_5075 and 7 homologs with ≥ 30% identity
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2fuaA / P0AB87 L-fuculose 1-phosphate aldolase crystal form t with cobalt (see paper)
26% identity, 97% coverage of query (80.9 bits)
Prd / b2800 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli K-12 substr. MG1655 (see 9 papers)
fucA / P0AB87 L-fuculose-phosphate aldolase (EC 4.1.2.17) from Escherichia coli (strain K12) (see 8 papers)
FUCA_ECOLI / P0AB87 L-fuculose phosphate aldolase; D-ribulose-phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Escherichia coli (strain K12) (see 7 papers)
fucA / RF|NP_417280 L-fuculose-1-phosphate aldolase from Escherichia coli K12 (see 3 papers)
26% identity, 97% coverage of query (80.9 bits)
4fuaA L-fuculose-1-phosphate aldolase complex with pgh
26% identity, 97% coverage of query (80.9 bits)
1dzuP L-fuculose-1-phosphate aldolase from escherichia coli mutant t26a
26% identity, 97% coverage of query (80.9 bits)
ALD2_ECO45 / B7MMH7 5-methylthioribulose-1-phosphate/5-deoxyribulose-1-phosphate aldolase; EC 4.1.2.62 from Escherichia coli O45:K1 (strain S88 / ExPEC) (see paper)
28% identity, 85% coverage of query (79.7 bits)
ald2 / J7RCN0 5-deoxyribulose 1-phosphate aldolase (EC 4.1.2.62) from Escherichia coli (see paper)
28% identity, 85% coverage of query (78.2 bits)
BWI76_RS22915 L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis M5al
28% identity, 93% coverage of query (77.8 bits)
7x78A L-fuculose 1-phosphate aldolase
28% identity, 82% coverage of query (72.8 bits)
ald2 / Q2RXI1 5-(methylthio)ribulose-1-phosphate aldolase (EC 4.1.2.62) from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) (see 2 papers)
ALD2_RHORT / Q2RXI1 5-methylthioribulose-1-phosphate/5-deoxyribulose-1-phosphate aldolase; EC 4.1.2.62 from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) (see 2 papers)
28% identity, 91% coverage of query (70.5 bits)
6btgA Crystal structure of deoxyribose-phosphate aldolase bound with dhap from bacillus thuringiensis (see paper)
27% identity, 89% coverage of query (67.4 bits)
drdA / P0DTQ0 5-deoxy-D-ribulose 1-phosphate aldolase (EC 4.1.2.62) from Bacillus thuringiensis serovar kurstaki (strain ATCC 35866 / NRRL B-4488 / HD73) (see paper)
DRDA_BACT7 / P0DTQ0 5-deoxy-D-ribulose 1-phosphate aldolase; 5-deoxyribose disposal aldolase; EC 4.1.2.- from Bacillus thuringiensis serovar kurstaki (strain ATCC 35866 / NRRL B-4488 / HD73) (see paper)
P0DTQ0 5-deoxyribulose 1-phosphate aldolase (EC 4.1.2.62) from Bacillus thuringiensis serovar kurstaki (see paper)
27% identity, 89% coverage of query (67.0 bits)
YjfX / b4198 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
ulaF / P39306 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli (strain K12) (see paper)
ULAF_ECOLI / P39306 L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 3 papers)
27% identity, 93% coverage of query (64.7 bits)
4c25A / A0A0H2US48 L-fuculose 1-phosphate aldolase (see paper)
24% identity, 90% coverage of query (62.4 bits)
F8D9F5 D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) (see paper)
32% identity, 77% coverage of query (60.8 bits)
CA265_RS08620 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Pedobacter sp. GW460-11-11-14-LB5
23% identity, 96% coverage of query (53.5 bits)
ARAD_BACSU / P94525 L-ribulose-5-phosphate 4-epimerase; Phosphoribulose isomerase; EC 5.1.3.4 from Bacillus subtilis (strain 168) (see paper)
27% identity, 91% coverage of query (53.5 bits)
BT1274 L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase from Bacteroides thetaiotaomicron VPI-5482
27% identity, 85% coverage of query (53.1 bits)
MUG14_SCHPO / Q9P5M9 Meiotically up-regulated gene 14 protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 2 papers)
24% identity, 82% coverage of query (52.0 bits)
Echvi_0503 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Echinicola vietnamensis KMM 6221, DSM 17526
25% identity, 95% coverage of query (50.4 bits)
AraD / b0061 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli K-12 substr. MG1655 (see 19 papers)
araD / P08203 L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli (strain K12) (see 18 papers)
ARAD_ECOLI / P08203 L-ribulose-5-phosphate 4-epimerase AraD; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli (strain K12) (see 11 papers)
araD / GB|BAB96630.1 L-ribulose-5-phosphate 4-epimerase; EC 5.1.3.4 from Escherichia coli K12 (see paper)
26% identity, 93% coverage of query (47.8 bits)
Shewana3_2065 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Shewanella sp. ANA-3
25% identity, 93% coverage of query (47.8 bits)
1jdiA / P08203 Crystal structure of l-ribulose-5-phosphate 4-epimerase (see paper)
26% identity, 86% coverage of query (46.2 bits)
4m6rA / Q96GX9 Structural and biochemical basis for the inhibition of cell death by apip, a methionine salvage enzyme (see paper)
24% identity, 83% coverage of query (44.3 bits)
MTNB_HUMAN / Q96GX9 Methylthioribulose-1-phosphate dehydratase; MTRu-1-P dehydratase; APAF1-interacting protein; hAPIP; EC 4.2.1.109 from Homo sapiens (Human) (see 4 papers)
Q96GX9 methylthioribulose 1-phosphate dehydratase (EC 4.2.1.109) from Homo sapiens (see 3 papers)
24% identity, 83% coverage of query (43.5 bits)
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Lawrence Berkeley National Laboratory