Searching for up to 100 curated homologs for Pf1N1B4_5603 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_5603 (399 a.a.)
Found high-coverage hits (≥70%) to 41 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
FADH_PSEPU / P46154 Glutathione-independent formaldehyde dehydrogenase; FALDH; FDH; Formaldehyde dismutase; EC 1.2.1.46; EC 1.2.98.1 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 3 papers)
P46154 formaldehyde dehydrogenase (EC 1.2.1.46) from Pseudomonas putida (see paper)
91% identity, 100% coverage of query (721 bits)
1kolA / P46154 Crystal structure of formaldehyde dehydrogenase (see paper)
91% identity, 99% coverage of query (716 bits)
Q9HTE3 formaldehyde dehydrogenase (EC 1.2.1.46) from Pseudomonas aeruginosa (see paper)
87% identity, 100% coverage of query (696 bits)
4jlwA Crystal structure of formaldehyde dehydrogenase from pseudomonas aeruginosa (see paper)
88% identity, 99% coverage of query (690 bits)
YYCR_BACSU / Q45604 Uncharacterized zinc-type alcohol dehydrogenase-like protein YycR; EC 1.-.-.- from Bacillus subtilis (strain 168) (see paper)
66% identity, 98% coverage of query (523 bits)
A0A6F8QRG1 formaldehyde dismutase (EC 1.2.98.1) from Methylobacterium sp. FD1 (see paper)
58% identity, 98% coverage of query (460 bits)
A0A224AQI3 formaldehyde dismutase (EC 1.2.98.1) from Methylobacterium sp. FD1 (see 2 papers)
55% identity, 98% coverage of query (443 bits)
FDM_PSEPU / Q52078 Formaldehyde dismutase; EC 1.2.98.1 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
59% identity, 99% coverage of query (440 bits)
2dphA / Q52078 Crystal structure of formaldehyde dismutase
59% identity, 99% coverage of query (438 bits)
YbdR / b0608 putative Zn2+-dependent alcohol dehydrogenase YbdR from Escherichia coli K-12 substr. MG1655 (see paper)
35% identity, 94% coverage of query (190 bits)
ADHB_BACSU / O06012 Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB; EC 1.-.-.- from Bacillus subtilis (strain 168) (see paper)
34% identity, 95% coverage of query (160 bits)
YHG1_SCHPO / Q9P6I8 Zinc-type alcohol dehydrogenase-like protein C1198.01; EC 1.-.-.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
31% identity, 94% coverage of query (156 bits)
Build an alignment for Pf1N1B4_5603 and 12 homologs with ≥ 30% identity
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4cpdA / B2ZRE3 Alcohol dehydrogenase tadh from thermus sp. Atn1
29% identity, 97% coverage of query (142 bits)
B2ZRE3 alcohol dehydrogenase (EC 1.1.1.1) from Thermus sp. (see paper)
29% identity, 97% coverage of query (141 bits)
Q9HMB6 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp. (see paper)
30% identity, 94% coverage of query (140 bits)
adh2 / Q768S7 NAD+-dependent secondary alcohol dehydrogenase II monomer from Gordonia sp. (strain TY-5) (see paper)
33% identity, 75% coverage of query (129 bits)
D4GP73 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii (see paper)
30% identity, 94% coverage of query (129 bits)
Q5V676 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloarcula marismortui (see paper)
29% identity, 94% coverage of query (122 bits)
5ylnA / A0A0H2ZRI0 Zinc dependent alcohol dehydrogenase 2 from streptococcus pneumonia - apo form
29% identity, 96% coverage of query (116 bits)
ADH_CUPNH / Q0KDL6 Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (Ralstonia eutropha) (see 2 papers)
27% identity, 94% coverage of query (102 bits)
gutB / Q06004 glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis (strain 168) (see paper)
DHSO_BACSU / Q06004 Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis (strain 168) (see paper)
gutB / GI|304153 L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis subsp. subtilis str. 168 (see 3 papers)
gutB / AAA22508.1 sorbitol dehydrogenase from Bacillus subtilis (see paper)
30% identity, 72% coverage of query (99.8 bits)
TDH_PYRFU / Q8U259 L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see paper)
Q8U259 alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus (see paper)
29% identity, 72% coverage of query (93.2 bits)
TDH_THEKO / Q5JI69 L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (see 2 papers)
Q5JI69 L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermococcus kodakarensis (see 2 papers)
27% identity, 90% coverage of query (92.8 bits)
3gfbA / Q5JI69 L-threonine dehydrogenase (tktdh) from the hyperthermophilic archaeon thermococcus kodakaraensis (see paper)
27% identity, 90% coverage of query (92.4 bits)
TDH_PYRHO / O58389 L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
O58389 L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii (see 2 papers)
29% identity, 72% coverage of query (90.5 bits)
2dfvA / O58389 Hyperthermophilic threonine dehydrogenase from pyrococcus horikoshii (see paper)
29% identity, 72% coverage of query (90.5 bits)
1dehA / P00325 Crystallization of human beta1 alcohol dehydrogenase (15 mg/ml) in 50 mm sodium phosphate (ph 7.5), 2.0 mm NAD+ and 1 mm 4-iodopyrazole at 25 oc, 13% (w/v) peg 8000 (see paper)
29% identity, 73% coverage of query (88.2 bits)
1u3vA Crystal structure of human alcohol dehydrogenase beta-1-beta-1 isoform complexed with n-heptylformamide determined to 1.65 angstrom resolution
29% identity, 73% coverage of query (88.2 bits)
1u3uA Crystal structure of human alcohol dehydrogenase beta-1-beta-1 isoform complexed with n-benzylformamide determined to 1.6 angstrom resolution
29% identity, 73% coverage of query (88.2 bits)
1hdxB Three-dimensional structures of three human alcohol dehydrogenase variants: correlations with their functional differences
29% identity, 73% coverage of query (88.2 bits)
ADH1B / P00325 alcohol dehydrogenase β subunit (EC 1.1.1.1; EC 1.1.1.80) from Homo sapiens (see 17 papers)
ADH1B_HUMAN / P00325 All-trans-retinol dehydrogenase [NAD(+)] ADH1B; Alcohol dehydrogenase 1B; Alcohol dehydrogenase subunit beta; EC 1.1.1.105 from Homo sapiens (Human) (see 7 papers)
29% identity, 73% coverage of query (87.8 bits)
1vj0A / Q9WYR7 Crystal structure of alcohol dehydrogenase (tm0436) from thermotoga maritima at 2.00 a resolution
29% identity, 84% coverage of query (79.0 bits)
DHSO_SHEEP / P07846 Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries (Sheep) (see 3 papers)
28% identity, 71% coverage of query (77.8 bits)
3qe3A / P07846 Sheep liver sorbitol dehydrogenase (see paper)
28% identity, 71% coverage of query (74.7 bits)
6ffxA Crystal structure of r. Ruber adh-a, mutant f43h (see paper)
26% identity, 87% coverage of query (64.7 bits)
5o9dA Crystal structure of r. Ruber adh-a, mutant y294f, w295a, y54f, f43h, h39y
26% identity, 87% coverage of query (64.3 bits)
2cdaA Sulfolobus solfataricus glucose dehydrogenase 1 in complex with NADP
24% identity, 72% coverage of query (52.8 bits)
2cdbA Sulfolobus solfataricus glucose dehydrogenase 1 in complex with NADP and glucose
24% identity, 72% coverage of query (52.0 bits)
2cd9A / O93715 Sulfolobus solfataricus glucose dehydrogenase 1 - apo form (see paper)
25% identity, 72% coverage of query (51.6 bits)
gdh / O93715 aldose 1-dehydrogenase subunit (EC 1.1.1.376; EC 1.1.1.359; EC 1.1.1.119) from Saccharolobus solfataricus (see 2 papers)
GLCDH_SACSO / O93715 Glucose 1-dehydrogenase; GDH; GlcDH; Aldose 1-dehydrogenase [NAD(P)(+)]; Galactose 1-dehydrogenase; EC 1.1.1.47; EC 1.1.1.359; EC 1.1.1.120; EC 1.1.1.48 from Saccharolobus solfataricus (Sulfolobus solfataricus) (see 3 papers)
Q7LYI9 aldose 1-dehydrogenase [NAD(P)+] (EC 1.1.1.359) from Saccharolobus solfataricus (see paper)
24% identity, 72% coverage of query (48.5 bits)
2cdcA Sulfolobus solfataricus glucose dehydrogenase 1 in complex with NADP and xylose
24% identity, 72% coverage of query (48.1 bits)
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Lawrence Berkeley National Laboratory