Searching for up to 100 curated homologs for Pf1N1B4_596 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_596 (435 a.a.)

Found high-coverage hits (≥70%) to 19 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_1894 ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component from Pseudomonas fluorescens GW456-L13
    92% identity, 100% coverage of query (814 bits)

PS417_22145 glucose/xylose ABC transporter, periplasmic substrate-binding component from Pseudomonas simiae WCS417
    80% identity, 100% coverage of query (680 bits)

TC 3.A.1.1.30 / Q88P38 GtsA (GLcE), component of Glucose porter, GtsABCD from Pseudomonas putida (strain KT2440) (see paper)
    79% identity, 97% coverage of query (651 bits)

5dviA / H7BRJ8 High resolution crystal structure of glucose complexed periplasmic glucose binding protein (ppgbp) from p. Putida csv86 (see paper)
    70% identity, 93% coverage of query (556 bits)

5dvjA Crystal structure of galactose complexed periplasmic glucose binding protein (ppgbp) from p. Putida csv86
    70% identity, 93% coverage of query (556 bits)

Ac3H11_2062 glucose ABC transporter, substrate-binding component from Acidovorax sp. GW101-3H11
    55% identity, 88% coverage of query (407 bits)

8hqqA / Q4FMK2 Crystal structure of the glucose-binding protein sar11_0769 from "candidatus pelagibacter ubique" htcc1062 bound to glucose
    49% identity, 87% coverage of query (354 bits)

4r2bA / A6X5L9 Crystal structure of sugar transporter oant_3817 from ochrobactrum anthropi, target efi-510528, with bound glucose
    46% identity, 93% coverage of query (346 bits)

SMc04259 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein from Sinorhizobium meliloti 1021
    36% identity, 78% coverage of query (197 bits)

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Build an alignment for Pf1N1B4_596 and 9 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

TC 3.A.1.1.24 / Q72KX2 Glucose-binding protein aka TT_C0328, component of The glucose/mannose porter TTC0326-8 plus MalK1 (ABC protein, shared with 3.A.1.1.25) from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (see paper)
    29% identity, 91% coverage of query (140 bits)

2b3bA / Q72KX2 Thermus thermophilus glucose/galactose binding protein with bound glucose (see paper)
    28% identity, 88% coverage of query (130 bits)

2b3fA Thermus thermophilus glucose/galactose binding protein bound with galactose
    28% identity, 88% coverage of query (130 bits)

2b3bC Thermus thermophilus glucose/galactose binding protein with bound glucose
    28% identity, 88% coverage of query (130 bits)

XACG_HALVD / D4GP35 Xylose/arabinose-binding protein XacG from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
    25% identity, 85% coverage of query (93.6 bits)

TC 3.A.1.1.50 / Q5SLB4 Sugar ABC transporter, periplasmic sugar-binding protein, component of Probable glycerophosphocholine (GPC) uptake porter (Chandravanshi et al. 2016). The system may include a receptor and three membrane proteins (of 378 aas and 6 TMSs, 299 aas and 7 TMSs, and 113 aas and 3 TMSs (?). The ATPase has not been identified from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
    25% identity, 77% coverage of query (49.3 bits)

7c0kB / Q5SLB4 Crystal structure of a dinucleotide-binding protein of abc transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (form ii) (see paper)
    25% identity, 77% coverage of query (48.5 bits)

7c0oB Crystal structure of a dinucleotide-binding protein (y56f) of abc transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine
    25% identity, 77% coverage of query (48.5 bits)

7c0kA Crystal structure of a dinucleotide-binding protein of abc transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (form ii)
    25% identity, 77% coverage of query (48.5 bits)

A0A3P4AR76 ABC-type glycerol 3-phosphate transporter (subunit 2/3) (EC 7.6.2.10) from Thermus thermophilus (see paper)
    25% identity, 77% coverage of query (47.4 bits)

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