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Searching for up to 100 curated homologs for Pf6N2E2_1679 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_1679 (259 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_3317 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens GW456-L13
    30% identity, 71% coverage of query (83.6 bits)

Pf6N2E2_611 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens FW300-N2E2
    30% identity, 71% coverage of query (82.8 bits)

kdlD / Q9I1Q1 2-keto-3-deoxy-L-lyxonate dehydratase (EC 4.2.1.43) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    30% identity, 72% coverage of query (74.7 bits)

Build an alignment

Build an alignment for Pf6N2E2_1679 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

SM_b20892 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Sinorhizobium meliloti 1021
    26% identity, 71% coverage of query (64.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory