Sites on a Tree


Searching for up to 100 curated homologs for Pf6N2E2_2770 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_2770 (504 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.80.1.1 / Q9FA44 TctA, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see 2 papers)
    65% identity, 99% coverage of query (671 bits)

HP15_2659 Citrate uptake transporter, large transmembrane component TctA from Marinobacter adhaerens HP15
    52% identity, 99% coverage of query (516 bits)

TC 2.A.80.1.2 / S6BBY9 Large transmembrane protein of the aromatic acids transporter, component of Terephthalate (TPA) aromatic acid uptake transport system, TpiBA/TphC from Comamonas sp. E6
    42% identity, 94% coverage of query (363 bits)

TC 2.A.80.1.4 / S5Y5N9 Citrate uptake transporter, membrane subunit, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
    39% identity, 98% coverage of query (325 bits)

Dshi_3121 Tricarboxylate transport membrane protein TctA from Dinoroseobacter shibae DFL-12
    43% identity, 95% coverage of query (324 bits)

Build an alignment

Build an alignment for Pf6N2E2_2770 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory