Searching for up to 100 curated homologs for Pf6N2E2_2836 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_2836 (259 a.a.)
Found high-coverage hits (≥70%) to 17 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
PS417_06705 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas simiae WCS417
97% identity, 100% coverage of query (510 bits)
PfGW456L13_4591 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens GW456-L13
96% identity, 100% coverage of query (506 bits)
AO353_17200 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens FW300-N2E3
95% identity, 100% coverage of query (503 bits)
CATJ_PSEKB / Q8VPF2 3-oxoadipate CoA-transferase subunit B; 3-oxoadipate:succinyl-CoA transferase subunit B; Beta-ketoadipate:succinyl-CoA transferase subunit B; EC 2.8.3.6 from Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) (see paper)
Q8VPF2 3-oxoadipate CoA-transferase (subunit 1/2) (EC 2.8.3.6) from Pseudomonas knackmussii (see 2 papers)
89% identity, 99% coverage of query (467 bits)
gctB / Q59112 GctB (EC 2.8.3.12) from Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4) (see paper)
Q59112 glutaconate CoA-transferase (subunit 1/2) (EC 2.8.3.12) from Acidaminococcus fermentans (see paper)
34% identity, 100% coverage of query (152 bits)
Build an alignment for Pf6N2E2_2836 and 5 homologs with ≥ 30% identity
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6cojB / Q0S7Q0 Crystal structure of rhodococcus jostii rha1 ipdab e105a cochea-coa complex (see paper)
29% identity, 83% coverage of query (78.2 bits)
IPDB_RHOJR / Q0S7Q0 Cholesterol ring-cleaving hydrolase IpdB subunit; (3E)-2-(2-carboxylatoethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA hydrolase beta subunit; COCHEA-CoA hydrolase beta subunit; EC 4.1.99.- from Rhodococcus jostii (strain RHA1) (see 2 papers)
29% identity, 83% coverage of query (78.2 bits)
5mzyB / Q1D4I3 Crystal structure of the decarboxylase aiba/aibb in complex with a possible transition state analog (see paper)
27% identity, 90% coverage of query (73.9 bits)
5mzzB Crystal structure of the decarboxylase aiba/aibb in complex with 3- methylglutaconate
27% identity, 90% coverage of query (73.9 bits)
5mzxB Crystal structure of the decarboxylase aiba/aibb in complex with 4'- diphospho pantetheine
27% identity, 90% coverage of query (73.9 bits)
ipdB / P9WPV9 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA ligase β subunit from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 6 papers)
IPDB_MYCTU / P9WPV9 Cholesterol ring-cleaving hydrolase IpdB subunit; (3E)-2-(2-carboxylatoethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA hydrolase beta subunit; COCHEA-CoA hydrolase beta subunit; EC 4.1.99.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
25% identity, 93% coverage of query (71.6 bits)
Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B from Pseudomonas fluorescens FW300-N2E2
27% identity, 86% coverage of query (62.0 bits)
scoB / P56007 succinyl-CoA-transferase subunit B (EC 2.8.3.5) from Helicobacter pylori (strain ATCC 700392 / 26695) (see paper)
29% identity, 79% coverage of query (60.1 bits)
Psest_1077 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) from Pseudomonas stutzeri RCH2
28% identity, 84% coverage of query (51.6 bits)
pct / G0VND6 propanoyl-CoA transferase monomer (EC 2.8.3.1) from Megasphaera elsdenii DSM 20460 (see 3 papers)
A0A140JTF0 propionate CoA-transferase (EC 2.8.3.1) from Megasphaera elsdenii (see paper)
26% identity, 82% coverage of query (50.4 bits)
Sama_1356 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B from Shewanella amazonensis SB2B
25% identity, 82% coverage of query (49.7 bits)
Q9L3F7 propionate CoA-transferase (EC 2.8.3.1) from Anaerotignum propionicum (see paper)
24% identity, 84% coverage of query (45.1 bits)
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Lawrence Berkeley National Laboratory