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Searching for up to 100 curated homologs for Pf6N2E2_2908 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_2908 (418 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

P13981 arginine deiminase (EC 3.5.3.6) from Pseudomonas aeruginosa (see 4 papers)
    83% identity, 100% coverage of query (741 bits)

A7LKB0 arginine deiminase (EC 3.5.3.6) from Pseudomonas plecoglossicida (see 4 papers)
    82% identity, 100% coverage of query (709 bits)

2a9gD / P13981 Structure of c406a arginine deiminase in complex with l-arginine (see paper)
    82% identity, 98% coverage of query (706 bits)

Q88P52 arginine deiminase (EC 3.5.3.6) from Pseudomonas putida (see paper)
    82% identity, 100% coverage of query (704 bits)

C1DD78 arginine deiminase (EC 3.5.3.6) from Laribacter hongkongensis (see paper)
    58% identity, 99% coverage of query (474 bits)

C1DD83 arginine deiminase (EC 3.5.3.6) from Laribacter hongkongensis (see paper)
    56% identity, 98% coverage of query (471 bits)

arcA / CAD13391.1 arginine deiminase from Lactobacillus hilgardii (see paper)
    33% identity, 97% coverage of query (236 bits)

arcA / CAA04682.1 arginine deiminase from Lactobacillus sakei (see 2 papers)
    33% identity, 97% coverage of query (229 bits)

ARCA_STRGC / A8AYL1 Arginine deiminase; ADI; Arginine dihydrolase; AD; EC 3.5.3.6 from Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288) (see paper)
    33% identity, 97% coverage of query (228 bits)

A0A3G2YMH7 arginine deiminase (EC 3.5.3.6) from Enterococcus faecalis (see paper)
    34% identity, 98% coverage of query (227 bits)

B5XMC3 arginine deiminase (EC 3.5.3.6) from Streptococcus pyogenes (see paper)
    33% identity, 97% coverage of query (226 bits)

arcA / GI|14349116 arginine deiminase; EC 3.5.3.6 from Enterococcus faecalis (see paper)
arcA / CAC41341.1 arginine deiminase from Enterococcus faecalis (see 2 papers)
    33% identity, 98% coverage of query (225 bits)

ARCA_STRPY / P0C0B3 Arginine deiminase; ADI; Arginine dihydrolase; AD; Streptococcal acid glycoprotein; EC 3.5.3.6 from Streptococcus pyogenes (see paper)
    33% identity, 97% coverage of query (225 bits)

Q2HYA0 arginine deiminase (EC 3.5.3.6) from Lactococcus lactis subsp. lactis (see 2 papers)
    34% identity, 97% coverage of query (217 bits)

1lxyA / P23793 Crystal structure of arginine deiminase covalently linked with l- citrulline (see paper)
    30% identity, 98% coverage of query (184 bits)

1s9rA Crystal structure of arginine deiminase covalently linked with a reaction intermediate
    30% identity, 98% coverage of query (184 bits)

Build an alignment

Build an alignment for Pf6N2E2_2908 and 16 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

Q8EVF6 arginine deiminase (EC 3.5.3.6) from Mycoplasma penetrans (see paper)
    26% identity, 97% coverage of query (154 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory