Searching for up to 100 curated homologs for PfGW456L13_2532 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_2532 (262 a.a.)

Found high-coverage hits (≥70%) to 11 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

ipdB / P9WPV9 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA ligase β subunit from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 6 papers)
IPDB_MYCTU / P9WPV9 Cholesterol ring-cleaving hydrolase IpdB subunit; (3E)-2-(2-carboxylatoethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA hydrolase beta subunit; COCHEA-CoA hydrolase beta subunit; EC 4.1.99.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
    39% identity, 94% coverage of query (182 bits)

IPDB_RHOJR / Q0S7Q0 Cholesterol ring-cleaving hydrolase IpdB subunit; (3E)-2-(2-carboxylatoethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA hydrolase beta subunit; COCHEA-CoA hydrolase beta subunit; EC 4.1.99.- from Rhodococcus jostii (strain RHA1) (see 2 papers)
    41% identity, 95% coverage of query (179 bits)

6cojB / Q0S7Q0 Crystal structure of rhodococcus jostii rha1 ipdab e105a cochea-coa complex (see paper)
    41% identity, 94% coverage of query (179 bits)

CATJ_PSEKB / Q8VPF2 3-oxoadipate CoA-transferase subunit B; 3-oxoadipate:succinyl-CoA transferase subunit B; Beta-ketoadipate:succinyl-CoA transferase subunit B; EC 2.8.3.6 from Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) (see paper)
Q8VPF2 3-oxoadipate CoA-transferase (subunit 1/2) (EC 2.8.3.6) from Pseudomonas knackmussii (see 2 papers)
    33% identity, 94% coverage of query (108 bits)

PfGW456L13_4591 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens GW456-L13
    31% identity, 94% coverage of query (104 bits)

PS417_06705 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas simiae WCS417
    32% identity, 94% coverage of query (104 bits)

AO353_17200 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) from Pseudomonas fluorescens FW300-N2E3
    32% identity, 94% coverage of query (103 bits)

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Build an alignment for PfGW456L13_2532 and 7 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

gctB / Q59112 GctB (EC 2.8.3.12) from Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4) (see paper)
Q59112 glutaconate CoA-transferase (subunit 1/2) (EC 2.8.3.12) from Acidaminococcus fermentans (see paper)
    25% identity, 93% coverage of query (73.6 bits)

5mzyB / Q1D4I3 Crystal structure of the decarboxylase aiba/aibb in complex with a possible transition state analog (see paper)
    24% identity, 95% coverage of query (57.0 bits)

5mzzB Crystal structure of the decarboxylase aiba/aibb in complex with 3- methylglutaconate
    25% identity, 87% coverage of query (56.2 bits)

5mzxB Crystal structure of the decarboxylase aiba/aibb in complex with 4'- diphospho pantetheine
    25% identity, 87% coverage of query (56.2 bits)

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