Sites on a Tree

 

Searching for up to 100 curated homologs for PfGW456L13_3207 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3207 (535 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

aruI / Q9HUI8 2-ketoarginine decarboxylase (EC 4.1.1.75) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
ARUI_PSEAE / Q9HUI8 Probable 2-ketoarginine decarboxylase AruI; 2-oxo-5-guanidinopentanoate decarboxylase; 5-guanidino-2-oxopentanoate decarboxylase; EC 4.1.1.75 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
    81% identity, 100% coverage of query (838 bits)

Q8U2A4 acetolactate synthase (EC 2.2.1.6) from Pyrococcus furiosus (see paper)
    31% identity, 98% coverage of query (243 bits)

IlvB / b3671 acetohydroxy acid synthase I subunit IlvB (EC 2.2.1.6) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
ilvB / P08142 acetohydroxy acid synthase I subunit IlvB (EC 2.2.1.6) from Escherichia coli (strain K12) (see 4 papers)
P08142 acetolactate synthase (subunit 2/2) (EC 2.2.1.6) from Escherichia coli (see paper)
    32% identity, 99% coverage of query (239 bits)

6lpiB / P08142 Crystal structure of ahas holo-enzyme (see paper)
    32% identity, 99% coverage of query (234 bits)

IlvI / b0077 acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli K-12 substr. MG1655 (see 9 papers)
ilvI / P00893 acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli (strain K12) (see 7 papers)
P00893 acetolactate synthase (subunit 2/2) (EC 2.2.1.6) from Escherichia coli (see paper)
    32% identity, 97% coverage of query (230 bits)

Build an alignment

Build an alignment for PfGW456L13_3207 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

P45261 acetolactate synthase (EC 2.2.1.6) from Haemophilus influenzae (see paper)
    29% identity, 99% coverage of query (224 bits)

Q8RL88 acetolactate synthase (subunit 2/2) (EC 2.2.1.6) from Geobacillus stearothermophilus (see paper)
ilvB / AAL99356.1 acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus (see paper)
    31% identity, 99% coverage of query (222 bits)

Q5S3P7 acetolactate synthase (EC 2.2.1.6) from Streptomyces cinnamonensis (see 2 papers)
ilvB / AAV52901.1 acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis (see paper)
    32% identity, 93% coverage of query (218 bits)

P42463 acetolactate synthase (EC 2.2.1.6) from Corynebacterium glutamicum (see paper)
    32% identity, 93% coverage of query (214 bits)

ilvB / O08353 acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus (see 2 papers)
    29% identity, 98% coverage of query (214 bits)

P37251 acetolactate synthase (EC 2.2.1.6) from Bacillus subtilis (see paper)
    30% identity, 93% coverage of query (214 bits)

ILVB1_MYCTU / P9WG41 Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 4 papers)
P9WG41 acetolactate synthase (subunit 2/2) (EC 2.2.1.6) from Mycobacterium tuberculosis (see paper)
    31% identity, 93% coverage of query (204 bits)

ilvB / Q0KCU4 acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
    29% identity, 98% coverage of query (202 bits)

Q5SJ01 acetolactate synthase (EC 2.2.1.6); pyruvate decarboxylase (EC 4.1.1.1) from Thermus thermophilus (see paper)
    31% identity, 98% coverage of query (202 bits)

1t9bA / P07342 Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron (see paper)
    29% identity, 98% coverage of query (199 bits)

thzk0150 / BAO66169.1 2-hydroxy-4-methyl-2-(2-phenylacetyl)pentanoic acid synthase from Thermosporothrix hazakensis (see paper)
    30% identity, 98% coverage of query (199 bits)

1t9dB Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl
    29% identity, 98% coverage of query (199 bits)

5wkcA Saccharomyces cerevisiae acetohydroxyacid synthase in complex with the herbicide penoxsulam
    29% identity, 98% coverage of query (199 bits)

A0A1X9M8K4 sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) from Alkalihalobacillus krulwichiae (see paper)
    29% identity, 94% coverage of query (198 bits)

3ea4A Arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron-ester
    32% identity, 87% coverage of query (197 bits)

3e9yA Arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron
    32% identity, 87% coverage of query (197 bits)

1t9bB Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron
    29% identity, 98% coverage of query (197 bits)

7tzzA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase p197t mutant in complex with bispyribac-sodium
    31% identity, 87% coverage of query (197 bits)

ILVG_ECOLI / P0DP90 Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli (strain K12) (see 2 papers)
ilvG / GB|CAA28573.1 acetolactate synthase isozyme 2 large subunit; EC 2.2.1.6 from Escherichia coli K12 (see 8 papers)
    31% identity, 92% coverage of query (196 bits)

5k2oA / P17597 Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a pyrimidinyl-benzoate herbicide, pyrithiobac (see paper)
    31% identity, 87% coverage of query (196 bits)

ILVB_ARATH / P17597 Acetolactate synthase, chloroplastic; AtALS; Acetohydroxy-acid synthase; Protein CHLORSULFURON RESISTANT 1; EC 2.2.1.6 from Arabidopsis thaliana (Mouse-ear cress) (see 16 papers)
P17597 acetolactate synthase (EC 2.2.1.6) from Arabidopsis thaliana (see 8 papers)
    31% identity, 87% coverage of query (196 bits)

Q5VB49 acetolactate synthase (EC 2.2.1.6) from Helianthus annuus (see paper)
    32% identity, 87% coverage of query (196 bits)

1n0hA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorimuron ethyl
    29% identity, 98% coverage of query (196 bits)

5k3sA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a pyrimidinyl-benzoate herbicide, bispyribac-sodium
    31% identity, 87% coverage of query (196 bits)

8et4A Crystal structure of wild-type arabidopsis thaliana acetohydroxyacid synthase in complex with amidosulfuron
    31% identity, 87% coverage of query (196 bits)

5wj1A Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a triazolopyrimidine herbicide, penoxsulam
    31% identity, 87% coverage of query (196 bits)

5k6tA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylamino-carbonyl-triazolinone herbicide, propoxycarbazone-sodium
    31% identity, 87% coverage of query (196 bits)

5k6rA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylamino-carbonyl-triazolinone herbicide, thiencarbazone-methyl
    31% identity, 87% coverage of query (196 bits)

1z8nA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with an imidazolinone herbicide, imazaquin
    31% identity, 87% coverage of query (196 bits)

1yi1A Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, tribenuron methyl
    31% identity, 87% coverage of query (196 bits)

1yi0A Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, sulfometuron methyl
    31% identity, 87% coverage of query (196 bits)

1yhzA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron
    31% identity, 87% coverage of query (196 bits)

1yhyA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl
    31% identity, 87% coverage of query (196 bits)

1ybhA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide chlorimuron ethyl
    31% identity, 87% coverage of query (196 bits)

1t9aA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, tribenuron methyl
    29% identity, 98% coverage of query (196 bits)

1t9cA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, sulfometuron methyl
    29% identity, 98% coverage of query (196 bits)

1t9dA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl
    29% identity, 98% coverage of query (196 bits)

Q5VB44 acetolactate synthase (EC 2.2.1.6) from Helianthus annuus (see paper)
    32% identity, 87% coverage of query (195 bits)

6u9dB / P07342 Saccharomyces cerevisiae acetohydroxyacid synthase (see paper)
    29% identity, 98% coverage of query (194 bits)

ILVB_YEAST / P07342 Acetolactate synthase catalytic subunit, mitochondrial; Acetohydroxy-acid synthase catalytic subunit; AHAS; ALS; EC 2.2.1.6 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
P07342 acetolactate synthase (EC 2.2.1.6) from Saccharomyces cerevisiae (see 5 papers)
    29% identity, 98% coverage of query (194 bits)

1jscA Crystal structure of the catalytic subunit of yeast acetohydroxyacid synthase: a target for herbicidal inhibitors
    29% identity, 98% coverage of query (194 bits)

6bd3A Saccharomyces cerevisiae acetohydroxyacid synthase
    29% identity, 98% coverage of query (193 bits)

6bd9A Saccharomyces cerevisiae acetohydroxyacid synthase
    29% identity, 98% coverage of query (191 bits)

5imsA Saccharomyces cerevisiae acetohydroxyacid synthase
    28% identity, 98% coverage of query (191 bits)

ilvB / AAA93098.1 acetolactate synthase from Streptomyces avermitilis (see paper)
    31% identity, 86% coverage of query (190 bits)

ilvB / AAB38426.1 acetolactate synthase from Mycobacterium avium (see paper)
    29% identity, 93% coverage of query (187 bits)

SYNPCC7002_A2770 / B1XMM5 2-oxoglutarate decarboxylase monomer (EC 4.1.1.71) from Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (see 2 papers)
B1XMM5 oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) from Synechococcus sp. PCC 7002 (see paper)
    27% identity, 98% coverage of query (187 bits)

Q42768 acetolactate synthase (EC 2.2.1.6) from Gossypium hirsutum (see paper)
    31% identity, 87% coverage of query (185 bits)

G0ZSE6 acetolactate synthase (EC 2.2.1.6) from Pseudomonas sp. (see paper)
    28% identity, 96% coverage of query (184 bits)

6wo1A / Q96VZ6 Hybrid acetohydroxyacid synthase complex structure with cryptococcus neoformans ahas catalytic subunit and saccharomyces cerevisiae ahas regulatory subunit (see paper)
    29% identity, 98% coverage of query (182 bits)

Q5M4L0 acetolactate synthase (EC 2.2.1.6) from Streptococcus thermophilus (see paper)
    27% identity, 99% coverage of query (181 bits)

6vz8D / P17597 Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
    31% identity, 87% coverage of query (180 bits)

P09342 Acetolactate synthase 1, chloroplastic; ALS I; Acetohydroxy-acid synthase I; Acetolactate synthase I; EC 2.2.1.6 from Nicotiana tabacum (Common tobacco)
    30% identity, 87% coverage of query (180 bits)

V5Q0Z4 acetolactate synthase (EC 2.2.1.6) from Myosoton aquaticum (see paper)
    30% identity, 87% coverage of query (179 bits)

Q5VB42 acetolactate synthase (EC 2.2.1.6) from Helianthus annuus (see paper)
    30% identity, 87% coverage of query (179 bits)

P09114 Acetolactate synthase 2, chloroplastic; ALS II; Acetohydroxy-acid synthase II; Acetolactate synthase II; EC 2.2.1.6 from Nicotiana tabacum (Common tobacco)
    30% identity, 87% coverage of query (179 bits)

Psest_1181 Glyoxylate carboligase (EC 4.1.1.47) from Pseudomonas stutzeri RCH2
    30% identity, 88% coverage of query (177 bits)

Q0K022 sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) from Cupriavidus necator (see paper)
    28% identity, 93% coverage of query (174 bits)

6denA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide iodomuron ethyl
    28% identity, 98% coverage of query (170 bits)

6demA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide bensulfuron methyl
    28% identity, 98% coverage of query (170 bits)

6delA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide chlorimuron ethyl
    28% identity, 98% coverage of query (170 bits)

6deqA / A0A1D8PJF9 Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide penoxsulam (see paper)
    28% identity, 98% coverage of query (167 bits)

6derA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide metosulam
    27% identity, 98% coverage of query (167 bits)

4rjkF Acetolactate synthase from bacillus subtilis bound to lthdp - crystal form ii
    27% identity, 98% coverage of query (167 bits)

6desA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide propoxycarbazone
    27% identity, 98% coverage of query (167 bits)

6depA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide sulfometuron methyl
    27% identity, 98% coverage of query (167 bits)

4rjkG Acetolactate synthase from bacillus subtilis bound to lthdp - crystal form ii
    27% identity, 98% coverage of query (167 bits)

4rjiC Acetolactate synthase from bacillus subtilis bound to thdp - crystal form i (see paper)
    27% identity, 98% coverage of query (167 bits)

6deoA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide iodomuron methyl
    28% identity, 98% coverage of query (167 bits)

8i07D Crystal structure of escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde
    28% identity, 88% coverage of query (165 bits)

8i07A Crystal structure of escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde
    28% identity, 88% coverage of query (165 bits)

6dekA Crystal structure of candida albicans acetohydroxyacid synthase catalytic subunit
    27% identity, 98% coverage of query (165 bits)

8beoB Crystal structure of e. Coli glyoxylate carboligase mutant i393a with map
    28% identity, 88% coverage of query (164 bits)

8beoA Crystal structure of e. Coli glyoxylate carboligase mutant i393a with map
    28% identity, 88% coverage of query (164 bits)

8i01A / P0AEP7 Crystal structure of escherichia coli glyoxylate carboligase (see paper)
    28% identity, 88% coverage of query (164 bits)

7egvA Acetolactate synthase from trichoderma harzianum with inhibitor harzianic acid (see paper)
    27% identity, 94% coverage of query (162 bits)

2ezuA Pyruvate oxidase variant f479w in complex with reaction intermediate 2-acetyl-thiamin diphosphate
    29% identity, 92% coverage of query (160 bits)

2ez9A Pyruvate oxidase variant f479w in complex with reaction intermediate analogue 2-phosphonolactyl-thiamin diphosphate
    29% identity, 92% coverage of query (160 bits)

2ez8A Pyruvate oxidase variant f479w in complex with reaction intermediate 2-lactyl-thiamin diphosphate
    29% identity, 92% coverage of query (160 bits)

2ez4B Pyruvate oxidase variant f479w
    29% identity, 92% coverage of query (160 bits)

4feeA High-resolution structure of pyruvate oxidase in complex with reaction intermediate 2-hydroxyethyl-thiamin diphosphate carbanion-enamine, crystal b (see paper)
    29% identity, 92% coverage of query (160 bits)

1powA The refined structures of a stabilized mutant and of wild-type pyruvate oxidase from lactobacillus plantarum
    29% identity, 92% coverage of query (160 bits)

1y9dD / P37063 Pyruvate oxidase variant v265a from lactobacillus plantarum (see paper)
    29% identity, 92% coverage of query (154 bits)

1ozfA The crystal structure of klebsiella pneumoniae acetolactate synthase with enzyme-bound cofactors
    27% identity, 98% coverage of query (139 bits)

6xn8A / A0A1H8YFL8 Crystal structure of 2-hydroxyacyl coa lyase (hacl) from rhodospirillales bacterium urhd0017
    26% identity, 87% coverage of query (139 bits)

HACL1 / Q9UJ83 2-hydroxyacyl-CoA lyase 1 (EC 4.1.2.63) from Homo sapiens (see 7 papers)
HACL1_HUMAN / Q9UJ83 2-hydroxyacyl-CoA lyase 1; 2-hydroxyphytanoyl-CoA lyase; 2-HPCL; Phytanoyl-CoA 2-hydroxylase 2; EC 4.1.2.63 from Homo sapiens (Human) (see 3 papers)
Q9UJ83 2-hydroxyacyl-CoA lyase (EC 4.1.2.63) from Homo sapiens (see 3 papers)
    24% identity, 97% coverage of query (139 bits)

8rphD 8rphD (see paper)
    27% identity, 96% coverage of query (137 bits)

8rpjA Janthe from janthinobacterium sp. Hh01
    27% identity, 96% coverage of query (137 bits)

8rpiA Janthe from janthinobacterium sp. Hh01, lactyl-thdp
    27% identity, 96% coverage of query (137 bits)

5d6rB Acetolactate synthase from klebsiella pneumoniae in complex with mechanism-based inhibitor
    27% identity, 98% coverage of query (136 bits)

5dx6B / P27696 Acetolactate synthase from klebsiella pneumoniae soaked with beta- fluoropyruvate
    27% identity, 98% coverage of query (135 bits)

1ozgA The crystal structure of klebsiella pneumoniae acetolactate synthase with enzyme-bound cofactor and with an unusual intermediate
    27% identity, 98% coverage of query (134 bits)

5dx6A Acetolactate synthase from klebsiella pneumoniae soaked with beta- fluoropyruvate
    27% identity, 98% coverage of query (133 bits)

2ihuA Carboxyethylarginine synthase from streptomyces clavuligerus: putative reaction intermediate complex
    27% identity, 91% coverage of query (133 bits)

ceaS / Q9LCV9 N2-(carboxyethyl)arginine synthase subunit (EC 2.5.1.66) from Streptomyces clavuligerus (see paper)
CEAS_STRCL / Q9LCV9 N(2)-(2-carboxyethyl)arginine synthase; CEA synthetase; CEAS; EC 2.5.1.66 from Streptomyces clavuligerus (see 3 papers)
    27% identity, 91% coverage of query (133 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory