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Searching for up to 100 curated homologs for PfGW456L13_3735 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3735 (321 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.80.1.4 / S5XTE7 Citrate uptake transporter, substrate binding protein, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
    35% identity, 90% coverage of query (185 bits)

Dshi_3123 Tricarboxylate transport protein TctC from Dinoroseobacter shibae DFL-12
    31% identity, 92% coverage of query (136 bits)

HP15_2661 Citrate uptake transporter, substrate-binding component TctC from Marinobacter adhaerens HP15
    30% identity, 91% coverage of query (127 bits)

Build an alignment

Build an alignment for PfGW456L13_3735 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

TC 2.A.80.1.1 / Q9FA46 TctC aka STM2786, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
    28% identity, 95% coverage of query (118 bits)

2dvzA / Q7W0A0 Structure of a periplasmic transporter (see paper)
    24% identity, 88% coverage of query (67.0 bits)

TC 2.A.80.1.2 / Q5D0X7 Terephthalate permease, component of Terephthalate (TPA) aromatic acid uptake transport system, TpiBA/TphC from Comamonas testosteroni
    26% identity, 77% coverage of query (56.2 bits)

tphCII / BAE47084.1 periplasmic terephthalate binding receptor from Comamonas sp. E6 (see paper)
    25% identity, 76% coverage of query (55.8 bits)

2f5xB / Q7VTS1 Structure of periplasmic binding protein bugd (see paper)
    26% identity, 70% coverage of query (48.9 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory