Searching for up to 100 curated homologs for RR42_RS11300 FitnessBrowser__Cup4G11:RR42_RS11300 (272 a.a.)

Found high-coverage hits (≥70%) to 13 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

udh / Q888H1 uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see 2 papers)
URODH_PSESM / Q888H1 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see paper)
Q888H1 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (see 4 papers)
    43% identity, 94% coverage of query (219 bits)

Pf1N1B4_4511 D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens FW300-N1B4
    43% identity, 94% coverage of query (217 bits)

3rfvA / Q7CRQ0 Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens complexed with nadh and product (see paper)
    45% identity, 94% coverage of query (214 bits)

udh / Q7CRQ0 D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum (strain C58 / ATCC 33970) (see 6 papers)
URODH_AGRFC / Q7CRQ0 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 4 papers)
Q7CRQ0 uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens (see 4 papers)
    45% identity, 94% coverage of query (214 bits)

PP_1171 Uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440
URODH_PSEPK / Q88NN6 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
Q88NN6 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440 (see paper)
    44% identity, 94% coverage of query (212 bits)

3rfxA Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens, y136a mutant complexed with NAD
    45% identity, 94% coverage of query (211 bits)

PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae WCS417
    41% identity, 94% coverage of query (202 bits)

HSERO_RS23040 D-galacturonate dehydrogenase (EC 1.1.1.203) from Herbaspirillum seropedicae SmR1
    39% identity, 94% coverage of query (195 bits)

D6Y7Y8 uronate dehydrogenase (EC 1.1.1.203) from Thermobispora bispora (see paper)
    42% identity, 93% coverage of query (186 bits)

azf / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase monomer (EC 1.1.1.388) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see paper)
G6PD_HALVD / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase; Glc6PDH; Archaeal zwischenferment; EC 1.1.1.388 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
D4GS48 glucose-6-phosphate dehydrogenase (NAD+) (EC 1.1.1.388) from Haloferax volcanii (see paper)
    33% identity, 85% coverage of query (112 bits)

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Build an alignment for RR42_RS11300 and 10 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

1r6dA Crystal structure of desiv double mutant (dtdp-glucose 4,6- dehydratase) from streptomyces venezuelae with NAD and dau bound
    27% identity, 80% coverage of query (57.8 bits)

desIV / Q9ZGH3 dTDP-glucose 4,6-dehydratase monomer (EC 4.2.1.46) from Streptomyces venezuelae (see paper)
    26% identity, 80% coverage of query (55.5 bits)

1r66A / Q9ZGH3 Crystal structure of desiv (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with NAD and tyd bound (see paper)
    26% identity, 80% coverage of query (55.5 bits)

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