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Searching for up to 100 curated homologs for RR42_RS17310 FitnessBrowser__Cup4G11:RR42_RS17310 (374 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

Removed hits that are identical to the query, leaving 4

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Psest_3840 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri RCH2
    52% identity, 95% coverage of query (339 bits)

Gox / b4468 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
glcE / P52073 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli (strain K12) (see 3 papers)
GLCE_ECOLI / P52073 Glycolate oxidase subunit GlcE; Glycolate dehydrogenase subunit GlcE; EC 1.1.99.14 from Escherichia coli (strain K12) (see 4 papers)
glcE / RF|YP_026191.1 glycolate oxidase, subunit glcE from Escherichia coli K12 (see paper)
glcE / AAB02531.1 glycolate oxidase subunit from Escherichia coli (see paper)
    49% identity, 97% coverage of query (315 bits)

SMc00833 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Sinorhizobium meliloti 1021
    38% identity, 97% coverage of query (199 bits)

PGA1_c29710 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) from Phaeobacter inhibens BS107
    38% identity, 93% coverage of query (184 bits)

Build an alignment

Build an alignment for RR42_RS17310 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory